#clustalw.cluster.settings=-l h_cpu=24:00:00 -l h_vmem=6000M -l ram=6000M\r
\r
\r
+###### CLUSTAL OMEGA CONFIGURATION ######\r
+local.clustalo.bin.windows=binaries/windows/clustalo/clustalo.exe\r
+local.clustalo.bin=binaries/src/clustalo/clustalo\r
+#cluster.clustalo.bin=/homes/pvtroshin/workspace/jaba2/binaries/src/clustalo/clustalo\r
+## This parameters specifies the directory where the matrices files are stored \r
+clustalo.presets.file=conf/settings/ClustalPresets.xml\r
+clustalo.parameters.file=conf/settings/ClustalParameters.xml\r
+#clustalo.limits.file=conf/settings/ClustalLimits.xml\r
+#clustalo.cluster.settings=-l h_cpu=24:00:00 -l h_vmem=6000M -l ram=6000M\r
+\r
+\r
###### MUSCLE CONFIGURATION ######\r
local.muscle.bin.windows=binaries/windows/muscle.exe\r
local.muscle.bin=binaries/src/muscle/muscle\r