Merge branch 'JWS-35' into JABAWS_Release_2_0

[jabaws.git] / conf / settings / IUPredParameters.xml

diff --git a/conf/settings/IUPredParameters.xml b/conf/settings/IUPredParameters.xml
index 1846cad..eb485c8 100644 (file)
--- a/conf/settings/IUPredParameters.xml
+++ b/conf/settings/IUPredParameters.xml
@@ -1,12 +1,15 @@
 <?xml version="1.0" encoding="US-ASCII" standalone="yes"?>\r
 <runnerConfig>\r
-       <runnerClassName>compbio.runner.disorder.Disembl</runnerClassName>\r
+       <runnerClassName>compbio.runner.disorder.IUPred</runnerClassName>\r
        <options isRequired="true">\r
         <name>Disorder type</name>\r
-        <description></description>\r
+        <description> "Long" - for prediction of long disordered regions, "short" - for \r
+        prediction of short disordered regions ( e.g. missing residues in\r
+  X-ray structures) and "glob" for predicting globular domains. "All" for all methods</description>\r
         <optionNames>short</optionNames>\r
         <optionNames>long</optionNames>\r
         <optionNames>glob</optionNames>\r
+        <optionNames>all</optionNames>\r
         <furtherDetails>prog_docs/iupred.txt</furtherDetails>\r
         <defaultValue>long</defaultValue>\r
     </options>\r