Apply formatting

[proteocache.git] / datadb / compbio / cassandra / DataBase.java

diff --git a/datadb/compbio/cassandra/DataBase.java b/datadb/compbio/cassandra/DataBase.java
index 016a30a..e741b39 100644 (file)
--- a/datadb/compbio/cassandra/DataBase.java
+++ b/datadb/compbio/cassandra/DataBase.java
@@ -4,16 +4,26 @@ import java.util.List;
 import java.util.ArrayList;
 import java.util.Collections;
 
+import compbio.beans.JobBean;
+import compbio.beans.ProteinBean;
+
 public class DataBase {
        private String date;
-       private int total;
-       private int totalId;
+       private int total; // total number of jobs
+       private int totalOK; // number of jobs with execution status OK
+       private int totalStopped; // number of jobs with execution status STOPPED
+       private int totalError; // number of jobs with execution status Jpred ERROR
+       private int totalTimeOut; // number of jobs with execution status TIMEOUT
+       private int totalJobs;
+       private int totalId; // total jobs for current protein sequence
        private String id;
-       private String prot;
+       private String ip;
+       private String prot; // protein sequence
        private String jpred;
-       private List<String> subProt;
        private List<Integer> timeRez;
        private List<Integer> timeTotalExec;
+       private JobBean logInfo;
+       private ProteinBean predictions;
 
        public DataBase() {
        }
@@ -28,6 +38,8 @@ public class DataBase {
        }
 
        public String getDate() {
+               if (null == date)
+                       return "1/1/1970";
                return date;
        }
 
@@ -39,6 +51,46 @@ public class DataBase {
                return total;
        }
 
+       public void setTotalOK(int tot) {
+               this.totalOK = tot;
+       }
+
+       public int getTotalOK() {
+               return totalOK;
+       }
+
+       public void setTotalStopped(int tot) {
+               this.totalStopped = tot;
+       }
+
+       public int getTotalStopped() {
+               return totalStopped;
+       }
+
+       public void setTotalError(int tot) {
+               this.totalError = tot;
+       }
+
+       public int getTotalError() {
+               return totalError;
+       }
+
+       public void setTotalTimeOut(int tot) {
+               this.totalTimeOut = tot;
+       }
+
+       public int getTotalTimeOut() {
+               return totalTimeOut;
+       }
+
+       public void setTotalJobs(int totalJobs) {
+               this.totalJobs = totalJobs;
+       }
+
+       public int getTotalJobs() {
+               return totalJobs;
+       }
+
        public void setTotalId(int totId) {
                this.totalId = totId;
        }
@@ -71,12 +123,12 @@ public class DataBase {
                return id;
        }
 
-       public void setSubProt(List<String> subProt) {
-               this.subProt = subProt;
+       public void setIp(String ip) {
+               this.ip = ip;
        }
 
-       public List<String> getSubProt() {
-               return subProt;
+       public String getIp() {
+               return ip;
        }
 
        public void setTimeRez(List<Integer> timeRez) {
@@ -86,7 +138,7 @@ public class DataBase {
        public List<Integer> getTimeRez() {
                return timeRez;
        }
-       
+
        public void setTimeTotalExec(List<Integer> timeTotalExec) {
                this.timeTotalExec = timeTotalExec;
        }
@@ -95,4 +147,20 @@ public class DataBase {
                return timeTotalExec;
        }
 
+       public void setLogInfo(JobBean logInfo) {
+               this.logInfo = logInfo;
+       }
+
+       public JobBean getLogInfo() {
+               return logInfo;
+       }
+
+       public void setPredictions(ProteinBean predictions) {
+               this.predictions = predictions;
+       }
+
+       public ProteinBean getPredictions() {
+               return predictions;
+       }
+
 }