import java.util.List;
import org.forester.io.parsers.PhylogenyParser;
+import org.forester.io.parsers.util.ParserUtils;
import org.forester.io.writers.PhylogenyWriter;
import org.forester.phylogeny.Phylogeny;
import org.forester.phylogeny.factories.ParserBasedPhylogenyFactory;
}
try {
final PhylogenyFactory factory = ParserBasedPhylogenyFactory.getInstance();
- final PhylogenyParser pp = ForesterUtil.createParserDependingOnFileType( species_tree_file, true );
+ final PhylogenyParser pp = ParserUtils.createParserDependingOnFileType( species_tree_file, true );
species_tree = factory.create( species_tree_file, pp )[ 0 ];
}
catch ( final IOException e ) {
}
try {
final PhylogenyFactory factory = ParserBasedPhylogenyFactory.getInstance();
- final PhylogenyParser pp = ForesterUtil.createParserDependingOnFileType( gene_tree_file, true );
+ final PhylogenyParser pp = ParserUtils.createParserDependingOnFileType( gene_tree_file, true );
gene_tree = factory.create( gene_tree_file, pp )[ 0 ];
}
catch ( final IOException e ) {