import org.forester.io.parsers.util.ParserUtils;
import org.forester.io.parsers.util.PhylogenyParserException;
import org.forester.phylogeny.Phylogeny;
+import org.forester.phylogeny.PhylogenyMethods;
import org.forester.phylogeny.PhylogenyNode;
import org.forester.phylogeny.factories.ParserBasedPhylogenyFactory;
import org.forester.phylogeny.factories.PhylogenyFactory;
final boolean is_rooted ) throws IOException {
final PhylogenyFactory factory = ParserBasedPhylogenyFactory.getInstance();
final NHXParser pars = new NHXParser();
- pars.setTaxonomyExtraction( ForesterUtil.TAXONOMY_EXTRACTION.NO );
+ pars.setTaxonomyExtraction( PhylogenyMethods.TAXONOMY_EXTRACTION.NO );
pars.setReplaceUnderscores( isReplaceUnderscores() );
pars.setIgnoreQuotes( isIgnoreQuotes() );
if ( rooted_info_present ) {