</div>
</td>
</tr>
+
+ <td width="60" nowrap>
+ <div align="center">
+ <strong><a name="Jalview.2.11.0">2.11.0</a><br />
+ <em>8/09/2018</em></strong>
+ </div>
+ </td>
+ <td><div align="left">
+ <em></em>
+ <ul>
+ <li>
+ <!-- -->
+ </li>
+ </ul>
+ </div></td>
+ <td><div align="left">
+ <em></em>
+ <ul>
+ <li>
+ <!-- JAL-3035 -->DAS sequence retrieval and annotation capabilities removed from the Jalview Desktop
+ </li>
+ </ul>
+ </div></td>
+ </tr>
<tr>
<td width="60" nowrap>
<div align="center">
- <strong><a name="Jalview.2.10.5">2.10.5</a><br /> <em>6/09/2018</em></strong>
+ <strong><a name="Jalview.2.10.5">2.10.5</a><br /> <em>10/09/2018</em></strong>
</div>
</td>
<td><div align="left">
<em></em>
<ul>
<li>
+ <!-- JAL-3101 -->Default memory for Jalview webstart and
+ InstallAnywhere increased to 1G.
+ </li>
+ <li>
<!-- JAL-247 -->Hidden sequence markers and representative
sequence bolding included when exporting alignment as EPS,
SVG, PNG or HTML. <em>Display is configured via the
</li>
<li>
<!-- JAL-3076 -->Ensembl client updated to Version 7 REST
- API and sequence data now imported as JSON
+ API and sequence data now imported as JSON.
</li>
<li>
<!-- JAL-3065 -->Change in recommended way of starting
<em></em>
<ul>
<li>
+ <!-- JAL-3104 -->Poorly scaled bar in quality annotation
+ row shown in Feredoxin Structure alignment view of example
+ alignment.
+ </li>
+ <li>
+ <!-- JAL-2854 -->Annotation obscures sequences if lots of
+ annotation displayed.
+ </li>
+ <li>
+ <!-- JAL-3107 -->Group conservation/consensus not shown
+ for newly created group when 'Apply to all groups'
+ selected
+ </li>
+ <li>
<!-- JAL-3087 -->Corrupted display when switching to
wrapped mode when sequence panel's vertical scrollbar is
visible.
</li>
<li>
<!-- JAL-3092 -->Jalview could hang when importing certain
- types of knotted RNA secondary structure
+ types of knotted RNA secondary structure.
</li>
<li>
<!-- JAL-3095 -->Sequence highlight and selection in
trimmed VARNA 2D structure is incorrect for sequences that
- do not start at 1
+ do not start at 1.
</li>
<li>
<!-- JAL-3061 -->'.' inserted into RNA secondary structure
annotation when columns are inserted into an alignment,
- and when exporting as Stockolm flatfile.
+ and when exporting as Stockholm flatfile.
</li>
<li>
<!-- JAL-3053 -->Jalview annotation rows containing upper
and lower-case 'E' and 'H' do not automatically get
- treated as RNA secondary structure
+ treated as RNA secondary structure.
+ </li>
+ <li>
+ <!-- JAL-3106 -->.jvp should be used as default extension
+ (not .jar) when saving a jalview project file.
+ </li>
+ <li>
+ <!-- JAL-3105 -->Mac Users: closing a window correctly
+ transfers focus to previous window on OSX
</li>
</ul>
- <em>Java 10 Issues</em>
+ <em>Java 10 Issues Resolved</em>
<ul>
<li>
<!-- JAL-2988 -->OSX - Can't save new files via the File
or export menus by typing in a name into the Save dialog
box.
</li>
+ <li>
+ <!-- JAL-2988 JAL-2968 -->Jalview now uses patched version
+ of the <a href="https://violetlib.org/vaqua/overview.html">VAqua5</a>
+ 'look and feel' which has improved compatibility with the
+ latest version of OSX.
+ </li>
</ul>
- </div>
+ </div>
</td>
</tr>
<tr>