<!--
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b1)
- * Copyright (C) 2015 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
Institute (EBI) and Distributed Annotation System servers that are
capable of serving sequences.
</li>
- <li>The <a href="../features/dasfeatures.html">DAS Feature
- Fetcher</a> enables the retrieval and visualization of features from
- DAS annotation sources
- </li>
- <li>The <a href="dbreffetcher.html">Database Reference
- Fetcher</a> transfers database references from records available
- from DAS or the public sequence databases.
- </li>
- <li>The <strong>Web Services</strong> menu in each alignment
+ <li>The <a href="dbreffetcher.html">Database Reference
+ Fetcher</a> transfers database references and annotation from the public
+ sequence databases.
+ </li>
+ <li>The <strong>Web Services</strong> menu in each alignment
window also provides access to the following:
<ul>
<li>Programs for <a href="msaclient.html">multiple
sequence alignment</a>, made available <em>via</em> <a
- href="JABAWS.html"
- >Java Bioinformatic Analysis Web Service (JABAWS)</a> servers.
+ href="JABAWS.html">Java Bioinformatic Analysis
+ Web Service (JABAWS)</a> servers.
</li>
<li>Jalview SOAP Web Services for <a href="jnet.html">secondary
structure prediction</a> based at the University of Dundee.
</li>
<li>Services for alignment analysis, such as <a
- href="shmr.html"
- >Multi-Harmony</a>.
+ href="shmr.html">Multi-Harmony</a>.
</ul>
<p>
<strong>Web Service Dialog Box</strong>
citation information, and monitors the progress of the
calculation. The cancel button will permanently cancel the job,
but this is only possible for some services.</p> The <a
- href="webServicesPrefs.html"
- >Web Services Preference panel</a> controls the display and appearance
- of the submission and analysis services in the <strong>Web
- Services</strong> menu.
+ href="webServicesPrefs.html">Web Services Preference
+ panel</a> controls the display and appearance of the submission and
+ analysis services in the <strong>Web Services</strong> menu.
</li>
<li>If Jalview encounters problems accessing any services, it
may display a <a href="webServicesPrefs.html#wswarnings">warning
<p>
<strong>More about Jalview's Web Services</strong> <br>
Jalview's distributed computations utilise <a
- href="http://en.wikipedia.org/wiki/SOAP"
- >SOAP</a> and <a
- href="http://en.wikipedia.org/wiki/Representational_State_Transfer"
- >REST</a> web services exposing sequence alignment, analysis, and
- secondary structure prediction programs. Originally, Jalview 2's
- services were maintained by the Barton group at the University of
- Dundee, and ran programs on the Life Sciences High-performace
- Computing Cluster. With the advent of <a
- href="http://www.compbio.dundee.ac.uk/JABAWS"
- >JABAWS</a>, however, it is possible for anyone to host Jalview web
- services.
+ href="http://en.wikipedia.org/wiki/SOAP">SOAP</a> and <a
+ href="http://en.wikipedia.org/wiki/Representational_State_Transfer">REST</a>
+ web services exposing sequence alignment, analysis, and secondary
+ structure prediction programs. Originally, Jalview 2's services were
+ maintained by the Barton group at the University of Dundee, and ran
+ programs on the Life Sciences High-performance Computing Cluster.
+ With the advent of <a href="http://www.compbio.dundee.ac.uk/jabaws">JABAWS</a>,
+ however, it is possible for anyone to host Jalview web services.
</p>
</body>
</html>