action.save_project = Save Project
action.save_project_as = Save Project as...
action.quit = Quit
-label.quit_jalview = Quit Jalview?
+action.force_quit = Force quit
+label.quit_jalview = Are you sure you want to quit Jalview?
+label.wait_for_save = Wait for save
+label.unsaved_changes = There are unsaved changes.
+label.unsaved_alignments = There are unsaved alignments.
+label.save_in_progress = Some files are still saving:
+label.confirm_quit_viewer = An external viewer is still open. Close the external window as well?
+label.confirm_quit_viewers = External viewers are still open. Close these external windows as well?
+label.unknown = Unknown
+label.quit_after_saving = Jalview will quit after saving.
+label.all_saved = All files saved.
+label.quitting_bye = Quitting, bye!
+action.wait = Wait
+action.cancel_quit = Cancel quit
action.expand_views = Expand Views
action.gather_views = Gather Views
action.page_setup = Page Setup...
action.select_all = Select all
action.select_highlighted_columns = Select Highlighted Columns
tooltip.select_highlighted_columns = Press B to mark highlighted columns, Ctrl-(or Cmd)-B to toggle, and Alt-B to mark all but highlighted columns
+action.copy_highlighted_regions = Copy Highlighted Regions
+tooltip.copy_highlighted_regions = Copies highlighted sequence regions to the clipboard for export or further analysis
action.deselect_all = Deselect all
action.invert_selection = Invert selection
action.using_jmol = Using Jmol
# delete Clustal - use FileFormat name instead
label.clustal = Clustal
# label.colourScheme_<schemeName> as in JalviewColourScheme, spaces removed
-label.colourScheme_clustal = Clustalx
+label.colourScheme_clustal = Clustal
label.colourScheme_blosum62 = BLOSUM62 Score
label.colourScheme_%identity = Percentage Identity
label.colourScheme_zappo = Zappo
label.colourScheme_buriedindex = Buried Index
label.colourScheme_purine/pyrimidine = Purine/Pyrimidine
label.colourScheme_nucleotide = Nucleotide
+label.colourScheme_nucleotideambiguity = Nucleotide Ambiguity
label.colourScheme_t-coffeescores = T-Coffee Scores
label.colourScheme_rnahelices = By RNA Helices
label.colourScheme_sequenceid = Sequence ID Colour
+label.colourScheme_gecos\:flower = gecos Flower
+label.colourScheme_gecos\:blossom = gecos Blossom
+label.colourScheme_gecos\:sunset = gecos Sunset
+label.colourScheme_gecos\:ocean = gecos Ocean
label.blc = BLC
label.fasta = Fasta
label.msf = MSF
label.sequence_details = Sequence Details
label.viewer_help = {0} Help
label.close_viewer = Close Viewer
+label.close_viewers = Close Viewers
label.confirm_close_viewer = This will close Jalview''s connection to {0}.<br>Do you want to close the {1} window as well?
label.all = All
label.sort_by = Sort alignment by
label.standard_databases = Standard Databases
label.fetch_embl_uniprot = Fetch from EMBL/EMBLCDS or Uniprot/PDB and any selected DAS sources
label.fetch_uniprot_references = Fetch Uniprot references
-label.search_3dbeacons = 3D-Beacons Search
+label.search_3dbeacons = Search 3D-Beacons
label.find_models_from_3dbeacons = Search 3D-Beacons for 3D structures and models
label.3dbeacons = 3D-Beacons
label.fetch_references_for = Fetch database references for {0} sequences ?
-label.fetch_references_for_3dbeacons = 3D Beacons needs Uniprot References. Fetch database references for {0} sequences ?
+label.fetch_references_for_3dbeacons = 3D Beacons needs to fetch Uniprot References for {0} sequences. Do you want to continue ?
label.reset_min_max_colours_to_defaults = Reset min and max colours to defaults from user preferences.
label.align_structures_using_linked_alignment_views = Superpose structures using {0} selected alignment view(s)
label.threshold_feature_display_by_score = Threshold the feature display by score.
label.open_url_param = Open URL {0}
label.open_url_seqs_param = Open URL ({0}..) ({1} seqs)
label.load_pdb_file_associate_with_sequence = Load a PDB file and associate it with sequence {0}
+label.load_pae_matrix_file_associate_with_structure = Load a PAE matrix file and associate it with structure {0}
label.reveal_hidden_columns = Reveal Hidden Columns with Right Mouse Button
label.dark_colour = Dark Colour
label.light_colour = Light Colour
label.web_browser_not_found_unix = Unixers\: Couldn't find default web browser.\nAdd the full path to your browser in Preferences."
label.web_browser_not_found = Web browser not found
label.select_pdb_file_for = Select a PDB file for {0}
+label.select_pae_matrix_file_for = Select a PAE matrix file for {0}
label.html = HTML
label.wrap = Wrap
label.show_database_refs = Show Database Refs
label.variable_color_for = Variable Feature Colour for {0}
label.select_background_colour = Select Background Colour
label.invalid_font = Invalid Font
+label.search_db_all = Search all of {0}
+label.search_db_index = Search {0} index {1}
label.separate_multiple_accession_ids = Enter one or more accession IDs separated by a semi-colon ";"
-label.separate_multiple_query_values = Enter one or more {0}s separated by a semi-colon ";"
+label.separate_multiple_query_values = Enter one or more {0} separated by a semi-colon ";"
label.search_all = Enter one or more search values separated by a semi-colon ";" (Note: This searches the entire database)
label.replace_commas_semicolons = Replace commas with semi-colons
label.parsing_failed_syntax_errors_shown_below_param = Parsing failed. Syntax errors shown below {0}
label.by_annotation_tooltip = Annotation Colour is configured from the main Colour menu
label.show_linked_features = Show {0} features
label.on_top = on top
+label.include_features = Include Features
+label.search_features = Search descriptions of displayed features
label.include_linked_features = Include {0} features
label.include_linked_tooltip = Include visible {0} features<br>converted to local sequence coordinates
label.features_not_shown = {0} feature(s) not shown
label.ignore_hidden_tooltip = Ignore any characters in hidden columns when matching
label.log_level = Log level
label.log_level_tooltip = Temporarily set the log level for this console. The log level will revert to {0} when this Java console is closed.
+label.copy = Copy
label.copy_to_clipboard = Copy to clipboard
label.copy_to_clipboard_tooltip = Copy all of the log text in this console to the system clipboard
label.startup = Startup
label.memory_example_tooltip = The memory allocated to Jalview is the smaller of the percentage of physical memory (default 90%) and the maximum absolute memory (default 32GB). If your computer's memory cannot be ascertained then the maximum absolute memory defaults to 8GB (if not customised).<br>Jalview will always try and reserve 512MB for the OS and at least 512MB for itself.
warning.wrong_jvm_version_title = Wrong Java Version
warning.wrong_jvm_version_message = The Java version being used (Java {0}) may lead to problems.\nThis installation of Jalview should be used with Java {1}.
+label.alphafold_reliability = Alphafold Reliability
+label.tftype_default = Default
+label.tftype_plddt = pLDDT
+label.optional = (optional)
+label.choose_tempfac_type = Choose Temperature Factor type
+label.add_pae_matrix_file = Add PAE matrix file
+label.nothing_selected = Nothing selected