JAL-2629 multiple HMMs can now be dropped onto an alignment

[jalview.git] / resources / lang / Messages.properties

diff --git a/resources/lang/Messages.properties b/resources/lang/Messages.properties
index 4819c29..ce9cb62 100644 (file)
--- a/resources/lang/Messages.properties
+++ b/resources/lang/Messages.properties
@@ -11,6 +11,7 @@ action.paste = Paste
 action.show_html_source = Show HTML Source
 action.print = Print...
 action.web_service = Web Service
+action.hmmer = HMMER
 action.cancel_job = Cancel Job
 action.start_job = Start Job
 action.revert = Revert
@@ -381,10 +382,8 @@ label.remove_from_default_list = Remove from default list?
 label.remove_user_defined_colour = Remove user defined colour
 label.you_must_select_least_two_sequences = You must select at least 2 sequences.
 label.invalid_selection = Invalid Selection
-label.principal_component_analysis_must_take_least_four_input_sequences = Principal component analysis must take\nat least 4 input sequences.
 label.sequence_selection_insufficient = Sequence selection insufficient
-label.you_need_more_two_sequences_selected_build_tree = You need to have more than two sequences selected to build a tree!
-label.you_need_more_than_n_sequences = You need to have more than {0} sequences
+label.you_need_at_least_n_sequences = You need to select at least {0} sequences
 label.not_enough_sequences = Not enough sequences
 label.selected_region_to_tree_may_only_contain_residues_or_gaps =  The selected region to create a tree may\nonly contain residues or gaps.\nTry using the Pad function in the edit menu,\nor one of the multiple sequence alignment web services.
 label.sequences_selection_not_aligned = Sequences in selection are not aligned
@@ -1303,9 +1302,21 @@ warn.name_cannot_be_duplicate = User-defined URL names must be unique and cannot
 label.invalid_name = Invalid Name !
 label.output_seq_details = Output Sequence Details to list all database references
 label.urllinks = Links
+label.togglehidden = Show hidden regions
 label.quality_descr = Alignment Quality based on Blosum62 scores
 label.conservation_descr = Conservation of total alignment less than {0}% gaps
 label.consensus_descr = PID
 label.complement_consensus_descr = PID for cDNA
 label.strucconsensus_descr = PID for base pairs
 label.occupancy_descr = Number of aligned positions 
+label.show_experimental = Enable experimental features
+label.show_experimental_tip = Enable any new and currently 'experimental' features (see Latest Release Notes for details)
+label.warning_hidden = Warning: {0} {1} is currently hidden
+label.change_hmmer_directory = Change HMMER suite location
+label.auto_align_seqs = Automatically Align New Sequences
+label.hmmalign = Align Sequences to HMM
+label.hmmbuild = Build HMM from Alignment
+label.hmmsearch = Search for Related Sequences
+warn.null_hmm = Please ensure the alignment contains a hidden Markov model.
+label.ignore_below_background_frequency = Ignore Below Background Frequency
+label.information_description = Information content, measured in bits