JWS-86 made few changes to text, plus couple of links were faulty so changed ClustalW...
[jabaws.git] / runner / compbio / runner / disorder / GlobPlot.java
index 6530f5f..2cb5953 100644 (file)
@@ -28,7 +28,7 @@ import compbio.data.sequence.UnknownFileFormatException;
 import compbio.engine.client.PipedExecutable;\r
 import compbio.engine.client.SkeletalExecutable;\r
 import compbio.metadata.ResultNotAvailableException;\r
-import compbio.runner.Util;\r
+import compbio.runner.RunnerUtil;\r
 \r
 /**\r
  * ./GlobPipe.py SmoothFrame DOMjoinFrame DOMpeakFrame DISjoinFrame DISpeakFrame\r
@@ -46,14 +46,10 @@ import compbio.runner.Util;
  * This is not a standard GlobPlot! The script has been modified!\r
  * \r
  */\r
-public class GlobPlot extends SkeletalExecutable<GlobPlot>\r
-               implements\r
-                       PipedExecutable<GlobPlot> {\r
+public class GlobPlot extends SkeletalExecutable<GlobPlot> implements PipedExecutable<GlobPlot> {\r
 \r
        private static Logger log = Logger.getLogger(GlobPlot.class);\r
 \r
-       public static final String KEY_VALUE_SEPARATOR = Util.SPACE;\r
-\r
        /* The parameter list there must not contain same values! */\r
        public GlobPlot() {\r
                // remove default input to prevent it to appear in the parameters list\r