import compbio.util.PropertyHelper;\r
\r
public class Tcoffee extends SkeletalExecutable<Tcoffee>\r
- implements PipedExecutable<Tcoffee> {\r
+ implements\r
+ PipedExecutable<Tcoffee> {\r
\r
private static Logger log = Logger.getLogger(Tcoffee.class);\r
\r
private final static String ncorePrm = "-n_core";\r
\r
/**\r
- * \r
- * @param workDirectory\r
*/\r
public Tcoffee() {\r
super(KEY_VALUE_SEPARATOR);\r
int cpunum = SkeletalExecutable.getClusterCpuNum(getType());\r
if (cpunum != 0) {\r
setNCore(cpunum);\r
- } \r
+ }\r
}\r
return super.getParameters(provider);\r
}\r
\r
-\r
@SuppressWarnings("unchecked")\r
@Override\r
public Class<Tcoffee> getType() {\r