<?xml version="1.0" encoding="UTF-8"?>
+<!--
+ Retrieved for Jalview 04-Apr-2019 from https://www.uniprot.org/docs/uniprot.xsd
+ Uniprot Release 2018_11: https://www.uniprot.org/news/2018/12/05/release
+ Generate Java binding classes by running this command in the schemas parent directory:
+ xjc schemas/uniprot.xsd -d src -p jalview.xml.binding.uniprot
+-->
<!-- *****************************************************************************
UniProt Knowledgebase
- Version: $Revision: 1.3 $
- Date: $Date: 2015/04/07 15:00:57 $
+ Version: $Revision$
+ Date: $Date$
Copyright (c) 2011 UniProt consortium
All rights reserved.
*******************************************************************************-->
<xs:schema targetNamespace="http://uniprot.org/uniprot" xmlns:xs="http://www.w3.org/2001/XMLSchema"
xmlns="http://uniprot.org/uniprot" elementFormDefault="qualified">
-<!--
- Retrieved for Jalview 13-Sep-2018 from https://www.uniprot.org/docs/uniprot.xsd
- Java binding classes are generated by
- xjc schemas/uniprot.xsd -d src -p jalview.xml.binding.uniprot
--->
<!-- XML Schema definition for the UniProtKB XML format
Tested with:
-XSV (XML Schema Validator), http://www.w3.org/2001/03/webdata/xsv
-->
+
+
<!-- Root element definition begins -->
<xs:element name="uniprot">
<xs:annotation>
<xs:sequence>
<xs:annotation>
+ <xs:documentation>Used in 'catalytic activity' annotations.</xs:documentation>
+ </xs:annotation>
+ <xs:element name="reaction" type="reactionType"/>
+ <xs:element name="physiologicalReaction" type="physiologicalReactionType" minOccurs="0" maxOccurs="2"/>
+ </xs:sequence>
+
+ <xs:sequence>
+ <xs:annotation>
<xs:documentation>Used in 'cofactor' annotations.</xs:documentation>
</xs:annotation>
<xs:element name="cofactor" type="cofactorType" maxOccurs="unbounded"/>
</xs:sequence>
</xs:group>
+ <xs:complexType name="reactionType">
+ <xs:annotation>
+ <xs:documentation>Describes a chemical reaction.</xs:documentation>
+ </xs:annotation>
+ <xs:sequence>
+ <xs:element name="text" type="xs:string"/>
+ <xs:element name="dbReference" type="dbReferenceType" minOccurs="1" maxOccurs="unbounded"/>
+ </xs:sequence>
+ <xs:attribute name="evidence" type="intListType" use="optional"/>
+ </xs:complexType>
+
+ <xs:complexType name="physiologicalReactionType">
+ <xs:annotation>
+ <xs:documentation>Describes a physiological reaction.</xs:documentation>
+ </xs:annotation>
+ <xs:sequence>
+ <xs:element name="dbReference" type="dbReferenceType"/>
+ </xs:sequence>
+ <xs:attribute name="direction" use="required">
+ <xs:simpleType>
+ <xs:restriction base="xs:string">
+ <xs:enumeration value="left-to-right"/>
+ <xs:enumeration value="right-to-left"/>
+ </xs:restriction>
+ </xs:simpleType>
+ </xs:attribute>
+ <xs:attribute name="evidence" type="intListType" use="optional"/>
+ </xs:complexType>
+
<xs:complexType name="cofactorType">
<xs:annotation>
<xs:documentation>Describes a cofactor.</xs:documentation>
<xs:simpleType name="intListType">
<xs:list itemType="xs:int"/>
</xs:simpleType>
-</xs:schema>
+</xs:schema>
\ No newline at end of file