created features report

[proteocache.git] / server / compbio / statistic / CassandraRequester.java

diff --git a/server/compbio/statistic/CassandraRequester.java b/server/compbio/statistic/CassandraRequester.java
index 1bb0050..f2336e7 100755 (executable)
--- a/server/compbio/statistic/CassandraRequester.java
+++ b/server/compbio/statistic/CassandraRequester.java
@@ -5,6 +5,7 @@ import java.text.SimpleDateFormat;
 import java.util.ArrayList;
 import java.util.Calendar;
 import java.util.Date;
+import java.util.HashMap;
 import java.util.List;
 import java.util.Map;
 
@@ -200,6 +201,24 @@ public class CassandraRequester {
                }
                return result;
        }
+       
+       /*
+        * query: protein feature
+        */
+       public Map<String, String> readProteinsPrediction(String feature, int percent) {
+               Map<String, String> result = db.ReadProtein();;
+               if (result == null)
+                       return null;
+               Map<String, String> query = new HashMap<String, String>();
+               for (Map.Entry<String, String> entry : result.entrySet()) {
+                       String pred = entry.getValue();                 
+                       if (pred.replaceAll("[^"+feature+"]", "").length() > pred.length() * percent / 100 && (!entry.getKey().equals(""))) {
+                       //      if (!entry.getKey().equals(""))
+                                       query.put(entry.getKey(), pred);
+                       }       
+               }
+               return query;
+       }
 
        /*
         * query protein sequences with number of jobs