/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
*/
package MCview;
-import java.awt.*;
+import java.awt.Color;
public class Bond
{
public Atom at2;
- public Bond(float[] start, float[] end, Atom at1, Atom at2)
+ public Bond(Atom at1, Atom at2)
{
- this.start = start;
- this.end = end;
+ this.start = new float[] { at1.x, at1.y, at1.z };
+ this.end = new float[] { at2.x, at2.y, at2.z };
this.startCol = at1.color;
this.endCol = at2.color;
this.at1 = at1;
public void translate(float x, float y, float z)
{
- start[0] = (start[0] + x);
- end[0] = (end[0] + x);
+ start[0] = start[0] + x;
+ end[0] = end[0] + x;
- start[1] = (start[1] + y);
- end[1] = (end[1] + y);
+ start[1] = start[1] + y;
+ end[1] = end[1] + y;
- start[2] = (start[2] + z);
- end[2] = (end[2] + z);
+ start[2] = start[2] + z;
+ end[2] = end[2] + z;
}
}