/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2b1)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
*/
package jalview.appletgui;
+import jalview.bin.JalviewLite;
+import jalview.datamodel.AlignmentAnnotation;
+import jalview.datamodel.GraphLine;
import jalview.datamodel.SequenceGroup;
import jalview.schemes.AnnotationColourGradient;
import jalview.schemes.ColourSchemeI;
Hashtable oldgroupColours;
- jalview.datamodel.AlignmentAnnotation currentAnnotation;
+ AlignmentAnnotation currentAnnotation;
boolean adjusting = false;
frame = new Frame();
frame.add(this);
- jalview.bin.JalviewLite.addFrame(frame,
+ JalviewLite.addFrame(frame,
MessageManager.getString("label.colour_by_annotation"), 560,
175);
validate();
&& currentAnnotation.threshold == null)
{
currentAnnotation
- .setThreshold(new jalview.datamodel.GraphLine(
+ .setThreshold(new GraphLine(
(currentAnnotation.graphMax - currentAnnotation.graphMin) / 2f,
"Threshold", Color.black));
}