import jalview.datamodel.PDBEntry;
import jalview.datamodel.SequenceI;
import jalview.ext.jmol.JalviewJmolBinding;
-import jalview.gui.IProgressIndicator;
import jalview.io.DataSourceType;
import jalview.structure.StructureSelectionManager;
import org.jmol.api.JmolAppConsoleInterface;
import org.jmol.console.AppletConsole;
-import org.jmol.java.BS;
+import javajs.util.BS;
class AppletJmolBinding extends JalviewJmolBinding
{
}
@Override
- public jalview.api.FeatureRenderer getFeatureRenderer(
- AlignmentViewPanel alignment)
- {
- return appletJmolBinding.ap.getFeatureRenderer();
- }
-
- @Override
public jalview.api.SequenceRenderer getSequenceRenderer(
AlignmentViewPanel alignment)
{
Container consolePanel, String buttonsToShow)
{
JmolAppConsoleInterface appc = new AppletConsole();
- appc.start(viewer);
+ appc.start(jmolViewer);
return appc;
}
@Override
public int[] resizeInnerPanel(String data)
{
- // TODO Auto-generated method stub
return null;
}
@Override
public Map<String, Object> getJSpecViewProperty(String arg0)
{
- // TODO Auto-generated method stub
- return null;
- }
-
- @Override
- protected IProgressIndicator getIProgressIndicator()
- {
- // no progress indicators on the applet
return null;
}
}