if ((group == null) && (av.getAlignment().getGroups().size() > 0))
{
- group = (SequenceGroup) av.getAlignment().getGroups().elementAt(0);
+ group = (SequenceGroup) av.getAlignment().getGroups().get(0);
groupIndex = 0;
}
break;
}
- group = (SequenceGroup) av.getAlignment().getGroups().elementAt(
+ group = (SequenceGroup) av.getAlignment().getGroups().get(
groupIndex);
} while (groupIndex < av.getAlignment().getGroups().size());