private boolean isNa = false;
/**
- * reference to the complementary CDS/Protein alignment for this alignment, if available
- */
- private AlignmentView complementView=null;
-
- /**
- * setter for
- * @param complementView
- */
- public void setComplement(AlignmentView complementView)
- {
- this.complementView = complementView;
-
- }
- /**
- *
- * @return true if a complement is available
- */
- public boolean hasComplementView()
- {
- return complementView!=null;
- }
- /**
- *
- * @return the complement view or null
- */
- public AlignmentView getComplementView()
- {
- return complementView;
- }
-
- /**
* false if the view concerns peptides
*
* @return