/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
*
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
- * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
* The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.datamodel;
description = desc;
secondaryStructure = ss;
value = val;
+
}
/**
return;
}
if (that.displayCharacter != null)
+ {
displayCharacter = new String(that.displayCharacter);
+ }
if (that.description != null)
+ {
description = new String(that.description);
+ }
secondaryStructure = that.secondaryStructure;
value = that.value;
colour = that.colour;
+
}
/**
*/
public Annotation(float val)
{
- this(null, null, ' ', val);
+ this(null, null, ' ', val, null);
}
/**
* human readable representation of an annotation row element.
- *
+ *
* Format is 'display Char','secondary Structure
* Char',"description",score,[colourstring]
- *
+ *
* fields may be missing if they are null, whitespace, or equivalent to
* Float.NaN
*/
{
sb.append(",");
}
- if (value != Float.NaN)
+ if (!Float.isNaN(value))
{
sb.append(value);
}