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JAL-2909 separate reverse and forward strand reads. fix subtle bug in handling insert...
[jalview.git]
/
src
/
jalview
/
datamodel
/
VisibleRowsCollection.java
diff --git
a/src/jalview/datamodel/VisibleRowsCollection.java
b/src/jalview/datamodel/VisibleRowsCollection.java
index
98153f9
..
fd7cf47
100644
(file)
--- a/
src/jalview/datamodel/VisibleRowsCollection.java
+++ b/
src/jalview/datamodel/VisibleRowsCollection.java
@@
-54,7
+54,12
@@
public class VisibleRowsCollection implements AlignmentRowsCollectionI
@Override
public SequenceI getSequence(int seq)
{
- return alignment.getSequenceAt(seq);
+ return alignment.getSequenceAtAbsoluteIndex(seq);
}
-}
+ @Override
+ public boolean hasHidden()
+ {
+ return false;
+ }
+}