/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
- * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1)
+ * Copyright (C) 2014 The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
- *
+ *
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.gui;
import java.awt.event.MouseEvent;
import java.awt.event.MouseListener;
import java.io.File;
-import java.text.DateFormat;
import java.util.ArrayList;
import java.util.Collection;
-import java.util.Date;
import java.util.List;
import javax.swing.DefaultListModel;
JLabel j = new JLabel("Structures Manager", JLabel.CENTER);
_listPanel.setLayout(new BorderLayout());
- //_listPanel.add(ops, BorderLayout.SOUTH);
+ // _listPanel.add(ops, BorderLayout.SOUTH);
_listPanel.add(j, BorderLayout.NORTH);
_listPanel.add(listScroller, BorderLayout.CENTER);
_rnaList.add(bck.config, bck.rna, bck.name, true);
} catch (ExceptionLoadingFailed e3)
{
- int mn=1;
- Collection<RNA> mdls=fr.orsay.lri.varna.factories.RNAFactory.loadSecStr(path);
- for (RNA r:mdls)
- {
- r.drawRNA(vp.getConfig());
- String name = r.getName();
- if (name.equals(""))
- {
- name = path.substring(path
- .lastIndexOf(File.separatorChar) + 1);
- }
- if (mdls.size()>1)
+ int mn = 1;
+ Collection<RNA> mdls = fr.orsay.lri.varna.factories.RNAFactory
+ .loadSecStr(path);
+ for (RNA r : mdls)
{
- name += " (Model "+mn+++")";
- }
- _rnaList.add(vp.getConfig().clone(), r, name, true);
+ r.drawRNA(vp.getConfig());
+ String name = r.getName();
+ if (name.equals(""))
+ {
+ name = path.substring(path
+ .lastIndexOf(File.separatorChar) + 1);
+ }
+ if (mdls.size() > 1)
+ {
+ name += " (Model " + mn++ + ")";
+ }
+ _rnaList.add(vp.getConfig().clone(), r, name, true);
}
}
}
* AppVarnaBinding vab = new AppVarnaBinding(); vab.varnagui.set_seq(str);
* vab.varnagui.setDefaultCloseOperation(JFrame.EXIT_ON_CLOSE);
* vab.varnagui.pack(); vab.varnagui.setVisible(true); } }
- */
\ No newline at end of file
+ */