_sideList.addMouseListener(new MouseAdapter()
{
@Override
- public void mouseClicked(MouseEvent e) {
+ public void mouseClicked(MouseEvent e)
+ {
AppVarnaBinding.this.mouseClicked(e);
}
});
_listPanel.add(j, BorderLayout.NORTH);
_listPanel.add(listScroller, BorderLayout.CENTER);
- new DropTarget(vp, new DropTargetAdapter() {
+ new DropTarget(vp, new DropTargetAdapter()
+ {
@Override
public void drop(DropTargetDropEvent dtde)
{
public String[][] getParameterInfo()
{
- String[][] info =
- {
+ String[][] info = {
// Parameter Name Kind of Value Description,
{ "sequenceDBN", "String", "A raw RNA sequence" },
{ "structureDBN", "String",
String name = r.getName();
if (name.equals(""))
{
- name = path.substring(path
- .lastIndexOf(File.separatorChar) + 1);
+ name = path.substring(
+ path.lastIndexOf(File.separatorChar) + 1);
}
if (mdls.size() > 1)
{
name += " (Model " + mn++ + ")";
}
- _rnaList.add(varnaPanel.getConfig().clone(), r, name, true);
+ _rnaList.add(varnaPanel.getConfig().clone(), r, name,
+ true);
}
}
}
_sideList.ensureIndexIsVisible(index);
/*
- * TODO Object newName = JOptionPane.showInputDialog( this,
+ * TODO Object newName = JvOptionPane.showInputDialog( this,
* "Specify a new name for this RNA", "Rename RNA",
- * JOptionPane.QUESTION_MESSAGE, (Icon)null, null, item.toString()); if
+ * JvOptionPane.QUESTION_MESSAGE, (Icon)null, null, item.toString()); if
* (newName!=null) { item.name = newName.toString();
* this._sideList.repaint(); }
*/
}
@Override
- public String[] getPdbFile()
+ public String[] getStructureFiles()
{
return null;
}
* restore the previous display
*/
vp.showRNA(sel.rna, sel.config);
-
+
return filePath;
} catch (IOException e)
{
*
* @param evt
*/
- protected void changeSelectedStructure_actionPerformed(ListSelectionEvent evt)
+ protected void changeSelectedStructure_actionPerformed(
+ ListSelectionEvent evt)
{
if (!evt.getValueIsAdjusting())
{