package jalview.gui;
import jalview.api.AlignViewportI;
-import jalview.renderer.seqfeatures.FeatureColourFinder;
+import jalview.renderer.OverviewRenderer;
import jalview.viewmodel.OverviewDimensions;
import java.awt.Color;
private OverviewDimensions od;
+ private OverviewRenderer or = null;
+
private AlignViewportI av;
public OverviewCanvas(OverviewDimensions overviewDims,
if (updaterunning)
{
restart = true;
+ if (or != null)
+ {
+ or.setRedraw(true);
+ }
}
else
{
{
fr.transferSettings(transferRenderer);
}
- FeatureColourFinder finder = new FeatureColourFinder(fr);
- // why do we need to set preferred size again? was set in
- // updateOverviewImage
setPreferredSize(new Dimension(od.getWidth(), od.getHeight()));
- OverviewRenderer or = new OverviewRenderer(sr, finder, od);
- miniMe = or.draw(od.getRows(av.getRanges(), av.getAlignment()),
- od
- .getColumns(av.getRanges(), av.getAlignment()
- .getHiddenColumns()));
+ or = new OverviewRenderer(sr, fr, od);
+ miniMe = or.draw(od.getRows(av.getAlignment()),
+ od.getColumns(av.getAlignment()));
Graphics mg = miniMe.getGraphics();
mg.translate(0, od.getSequencesHeight());
or.drawGraph(mg, av.getAlignmentConservationAnnotation(),
av.getCharWidth(), od.getGraphHeight(),
- od.getColumns(
- av.getRanges(), av.getAlignment().getHiddenColumns()));
+ od.getColumns(av.getAlignment()));
mg.translate(0, -od.getSequencesHeight());
}
System.gc();