+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
package jalview.gui;
import java.awt.event.ActionEvent;
stopProgressBar("", startTime);
}
- StructureFile pdb = binding.getSsm().setMapping(
- binding.getSequence()[pos], binding.getChains()[pos],
- pe.getFile(), protocol, getProgressIndicator());
+ StructureFile pdb = null;
+ if (pe.hasStructureFile())
+ {
+ pdb = pe.getStructureFile();
+ Console.debug("(Re)Using StructureFile " + pdb.getId());
+ }
+ else
+ {
+ pdb = binding.getSsm().setMapping(binding.getSequence()[pos],
+ binding.getChains()[pos], pe.getFile(), protocol,
+ getProgressIndicator());
+ }
binding.stashFoundChains(pdb, pe.getFile());
} catch (Exception ex)
{