/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b1)
- * Copyright (C) 2015 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
import java.util.IdentityHashMap;
import java.util.Iterator;
import java.util.List;
-import java.util.Set;
import java.util.Vector;
import java.util.jar.JarInputStream;
import java.util.jar.JarOutputStream;
// to the align frames.
boolean gathered = false;
String newviewid = null;
- Set<AlignedCodonFrame> mappings = av.getAlignment()
+ List<AlignedCodonFrame> mappings = av.getAlignment()
.getCodonFrames();
for (int i = 0; i < views.length; i++)
{
}
// Store any sequence mappings.
- Set<AlignedCodonFrame> cframes = av.getAlignment().getCodonFrames();
+ List<AlignedCodonFrame> cframes = av.getAlignment().getCodonFrames();
if (cframes != null)
{
for (AlignedCodonFrame acf : cframes)