+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
package jalview.schemes;
-
/**
* An enum with the colour schemes supported by Jalview.
*/
* the order of declaration is the default order in which
* items are added to Colour menus
*/
- Clustal("Clustal", ClustalxColourScheme.class), Blosum62("Blosum62",
- Blosum62ColourScheme.class), PID("% Identity",
- PIDColourScheme.class), Zappo("Zappo", ZappoColourScheme.class),
- Taylor("Taylor", TaylorColourScheme.class), Hydrophobic("Hydrophobic",
- HydrophobicColourScheme.class), Helix("Helix Propensity",
- HelixColourScheme.class), Strand("Strand Propensity",
- StrandColourScheme.class), Turn("Turn Propensity",
- TurnColourScheme.class), Buried("Buried Index",
- BuriedColourScheme.class), Nucleotide("Nucleotide",
- NucleotideColourScheme.class), PurinePyrimidine(
- "Purine/Pyrimidine", PurinePyrimidineColourScheme.class),
- RNAHelices("RNA Helices", RNAHelicesColour.class), TCoffee(
- "T-Coffee Scores", TCoffeeColourScheme.class);
+ Clustal("Clustal", ClustalxColourScheme.class),
+ Blosum62("Blosum62", Blosum62ColourScheme.class),
+ PID("% Identity", PIDColourScheme.class),
+ Zappo("Zappo", ZappoColourScheme.class),
+ Taylor("Taylor", TaylorColourScheme.class),
+ Hydrophobic("Hydrophobic", HydrophobicColourScheme.class),
+ Helix("Helix Propensity", HelixColourScheme.class),
+ Strand("Strand Propensity", StrandColourScheme.class),
+ Turn("Turn Propensity", TurnColourScheme.class),
+ Buried("Buried Index", BuriedColourScheme.class),
+ Nucleotide("Nucleotide", NucleotideColourScheme.class),
+ PurinePyrimidine("Purine/Pyrimidine", PurinePyrimidineColourScheme.class),
+ RNAHelices("RNA Helices", RNAHelicesColour.class),
+ TCoffee("T-Coffee Scores", TCoffeeColourScheme.class),
+ IdColour("Sequence ID", IdColourScheme.class);
// RNAInteraction("RNA Interaction type", RNAInteractionColourScheme.class)
private String name;