/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6)
- * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
- *
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
- * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.ws;
+import jalview.ws.params.ArgumentI;
+import jalview.ws.params.WsParamSetI;
+
+import java.util.Hashtable;
+import java.util.List;
+import java.util.Map;
+
/**
* Generic properties for an individual job within a Web Service Client thread.
* Derived from jalview web services version 1 statuses, and revised for Jws2.
protected String jobId;
/**
- * @param jobId the jobId to set
+ * @param jobId
+ * the jobId to set
*/
public void setJobId(String jobId)
{
int allowedServerExceptions = 3;
/**
- * @param allowedServerExceptions the allowedServerExceptions to set
+ * @param allowedServerExceptions
+ * the allowedServerExceptions to set
*/
public void setAllowedServerExceptions(int allowedServerExceptions)
{
protected boolean submitted = false;
/**
- * @param jobnum the jobnum to set
+ * @param jobnum
+ * the jobnum to set
*/
public void setJobnum(int jobnum)
{
}
/**
- * @param submitted the submitted to set
+ * @param submitted
+ * the submitted to set
*/
public void setSubmitted(boolean submitted)
{
}
/**
- * @param subjobComplete the subjobComplete to set
+ * @param subjobComplete
+ * the subjobComplete to set
*/
public void setSubjobComplete(boolean subjobComplete)
{
*/
protected boolean subjobComplete = false;
+ protected WsParamSetI preset = null;
+
+ protected List<ArgumentI> arguments = null;
+
+ protected Hashtable<String, Map> SeqNames = new Hashtable();
+
public AWsJob()
{
}
abstract public String getStatus();
abstract public boolean hasResponse();
+
abstract public void clearResponse();
+
abstract public String getState();
+
/**
* generates response using the abstract service flags.
- * @return a standard state response
+ *
+ * @return a standard state response
*/
- protected String _defaultState() {
-
+ protected String _defaultState()
+ {
+
String state = "";
return state;
}
+
+ public void setPreset(WsParamSetI jobpreset)
+ {
+ preset = jobpreset;
+ }
+
+ public void setArguments(List<ArgumentI> paramset)
+ {
+ arguments = paramset;
+
+ }
+
+ public boolean isPresetJob()
+ {
+ return preset!=null && arguments==null;
+ }
+
+ public List<ArgumentI> getArguments()
+ {
+ return arguments;
+ }
+
+ public WsParamSetI getPreset()
+ {
+ return preset;
+ }
+
+ long nextChunk = 0;
+
+ /**
+ * update the record of the last position in the log file read for this job
+ *
+ * @param nextChunk
+ */
+ public void setnextChunk(long nextChunk)
+ {
+ this.nextChunk = nextChunk;
+ }
+
+ public long getNextChunk()
+ {
+ return nextChunk;
+ }
}