/*
- * Jalview - A Sequence Alignment Editor and Viewer (Development Version 2.4.1)
- * Copyright (C) 2009 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5)
+ * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
*
- * This program is free software; you can redistribute it and/or
- * modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation; either version 2
- * of the License, or (at your option) any later version.
+ * This file is part of Jalview.
*
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- * GNU General Public License for more details.
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
*
- * You should have received a copy of the GNU General Public License
- * along with this program; if not, write to the Free Software
- * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
*/
package jalview.ws;
* @author $author$
* @version $Revision$
*/
-public class MsaWSClient extends WSClient
+public class MsaWSClient extends WS1Client
{
/**
* server is a WSDL2Java generated stub for an archetypal MsaWSI service.
* retrieved ServiceHandle
*
* @param sh
- * service handle of type AbstractName(MsaWS)
+ * service handle of type AbstractName(MsaWS)
* @param altitle
- * DOCUMENT ME!
+ * DOCUMENT ME!
* @param msa
- * DOCUMENT ME!
+ * DOCUMENT ME!
* @param submitGaps
- * DOCUMENT ME!
+ * DOCUMENT ME!
* @param preserveOrder
- * DOCUMENT ME!
+ * DOCUMENT ME!
*/
public MsaWSClient(ext.vamsas.ServiceHandle sh, String altitle,
{
this.server = (MuscleWS) loc.getMuscleWS(new java.net.URL(WsURL));
((MuscleWSSoapBindingStub) this.server).setTimeout(60000); // One minute
- // timeout
+ // timeout
} catch (Exception ex)
{
wsInfo.setProgressText("Serious! " + WebServiceName