*/
package jalview.ws.dbsources;
-import jalview.ws.seqfetcher.DbSourceProxy;
-
/**
* flyweight class specifying retrieval of Full family alignments from PFAM
*
*/
-public class PfamFull extends Pfam implements DbSourceProxy
+public class PfamFull extends Pfam
{
public PfamFull()
{
super();
}
- /*
- * (non-Javadoc)
- *
- * @see jalview.ws.dbsources.Pfam#getPFAMURL()
- */
- protected String getXFAMURL()
+ @Override
+ public String getURLSuffix()
{
- return "http://pfam.sanger.ac.uk/family/alignment/download/format?alnType=full&format=stockholm&order=t&case=l&gaps=default&entry=";
+ return "/alignment/full" + GZIPPED;
}
/*
*
* @see jalview.ws.seqfetcher.DbSourceProxy#getDbName()
*/
+ @Override
public String getDbName()
{
return "PFAM (Full)";
}
+ @Override
public String getDbSource()
{
return getDbName(); // so we have unique DbSource string.
}
+ @Override
public String getTestQuery()
{
return "PF03760";
}
+ @Override
public String getDbVersion()
{
return null;