autogenerated java classes for current schema

[vamsas.git] / src / org / vamsas / objects / core / AlignmentDescriptor.java

diff --git a/src/org/vamsas/objects/core/AlignmentDescriptor.java b/src/org/vamsas/objects/core/AlignmentDescriptor.java
index 5030b0c..3d32f8c 100644 (file)
--- a/src/org/vamsas/objects/core/AlignmentDescriptor.java
+++ b/src/org/vamsas/objects/core/AlignmentDescriptor.java
@@ -181,30 +181,72 @@ public class AlignmentDescriptor extends org.exolab.castor.xml.util.XMLClassDesc
         { //-- local scope
         }
         desc.setValidator(fieldValidator);
+        //-- _modifiable
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_modifiable", "modifiable", org.exolab.castor.xml.NodeType.Attribute);
+        handler = new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                Alignment target = (Alignment) object;
+                if(!target.hasModifiable())
+                    return null;
+                return (target.getModifiable() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE);
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    Alignment target = (Alignment) object;
+                    // if null, use delete method for optional primitives 
+                    if (value == null) {
+                        target.deleteModifiable();
+                        return;
+                    }
+                    target.setModifiable( ((java.lang.Boolean)value).booleanValue());
+                }
+                catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance( java.lang.Object parent ) {
+                return null;
+            }
+        };
+        desc.setHandler(handler);
+        desc.setMultivalued(false);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _modifiable
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        { //-- local scope
+            BooleanValidator typeValidator = new BooleanValidator();
+            fieldValidator.setValidator(typeValidator);
+        }
+        desc.setValidator(fieldValidator);
         //-- initialize element descriptors
         
-        //-- _alignmentAnnotationsList
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(org.vamsas.objects.core.AlignmentAnnotations.class, "_alignmentAnnotationsList", "AlignmentAnnotations", org.exolab.castor.xml.NodeType.Element);
+        //-- _alignmentAnnotationList
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(org.vamsas.objects.core.AlignmentAnnotation.class, "_alignmentAnnotationList", "AlignmentAnnotation", org.exolab.castor.xml.NodeType.Element);
         handler = new org.exolab.castor.xml.XMLFieldHandler() {
             public java.lang.Object getValue( java.lang.Object object ) 
                 throws IllegalStateException
             {
                 Alignment target = (Alignment) object;
-                return target.getAlignmentAnnotations();
+                return target.getAlignmentAnnotation();
             }
             public void setValue( java.lang.Object object, java.lang.Object value) 
                 throws IllegalStateException, IllegalArgumentException
             {
                 try {
                     Alignment target = (Alignment) object;
-                    target.addAlignmentAnnotations( (org.vamsas.objects.core.AlignmentAnnotations) value);
+                    target.addAlignmentAnnotation( (org.vamsas.objects.core.AlignmentAnnotation) value);
                 }
                 catch (java.lang.Exception ex) {
                     throw new IllegalStateException(ex.toString());
                 }
             }
             public java.lang.Object newInstance( java.lang.Object parent ) {
-                return new org.vamsas.objects.core.AlignmentAnnotations();
+                return new org.vamsas.objects.core.AlignmentAnnotation();
             }
         };
         desc.setHandler(handler);
@@ -212,7 +254,7 @@ public class AlignmentDescriptor extends org.exolab.castor.xml.util.XMLClassDesc
         desc.setMultivalued(true);
         addFieldDescriptor(desc);
         
-        //-- validation code for: _alignmentAnnotationsList
+        //-- validation code for: _alignmentAnnotationList
         fieldValidator = new org.exolab.castor.xml.FieldValidator();
         fieldValidator.setMinOccurs(0);
         { //-- local scope
@@ -289,6 +331,41 @@ public class AlignmentDescriptor extends org.exolab.castor.xml.util.XMLClassDesc
         { //-- local scope
         }
         desc.setValidator(fieldValidator);
+        //-- _propertyList
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(org.vamsas.objects.core.Property.class, "_propertyList", "property", org.exolab.castor.xml.NodeType.Element);
+        handler = new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                Alignment target = (Alignment) object;
+                return target.getProperty();
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    Alignment target = (Alignment) object;
+                    target.addProperty( (org.vamsas.objects.core.Property) value);
+                }
+                catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance( java.lang.Object parent ) {
+                return new org.vamsas.objects.core.Property();
+            }
+        };
+        desc.setHandler(handler);
+        desc.setNameSpaceURI("http://www.vamsas.org");
+        desc.setMultivalued(true);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _propertyList
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        fieldValidator.setMinOccurs(0);
+        { //-- local scope
+        }
+        desc.setValidator(fieldValidator);
         //-- _provenance
         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(org.vamsas.objects.core.Provenance.class, "_provenance", "Provenance", org.exolab.castor.xml.NodeType.Element);
         handler = new org.exolab.castor.xml.XMLFieldHandler() {