removed after schema modification,

[vamsas.git] / src / org / vamsas / objects / core / AlignmentDescriptor.java

diff --git a/src/org/vamsas/objects/core/AlignmentDescriptor.java b/src/org/vamsas/objects/core/AlignmentDescriptor.java
index b5292e3..5030b0c 100644 (file)
--- a/src/org/vamsas/objects/core/AlignmentDescriptor.java
+++ b/src/org/vamsas/objects/core/AlignmentDescriptor.java
@@ -183,8 +183,8 @@ public class AlignmentDescriptor extends org.exolab.castor.xml.util.XMLClassDesc
         desc.setValidator(fieldValidator);
         //-- initialize element descriptors
         
-        //-- _alignmentAnnotations
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(org.vamsas.objects.core.AlignmentAnnotations.class, "_alignmentAnnotations", "AlignmentAnnotations", org.exolab.castor.xml.NodeType.Element);
+        //-- _alignmentAnnotationsList
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(org.vamsas.objects.core.AlignmentAnnotations.class, "_alignmentAnnotationsList", "AlignmentAnnotations", org.exolab.castor.xml.NodeType.Element);
         handler = new org.exolab.castor.xml.XMLFieldHandler() {
             public java.lang.Object getValue( java.lang.Object object ) 
                 throws IllegalStateException
@@ -197,7 +197,7 @@ public class AlignmentDescriptor extends org.exolab.castor.xml.util.XMLClassDesc
             {
                 try {
                     Alignment target = (Alignment) object;
-                    target.setAlignmentAnnotations( (org.vamsas.objects.core.AlignmentAnnotations) value);
+                    target.addAlignmentAnnotations( (org.vamsas.objects.core.AlignmentAnnotations) value);
                 }
                 catch (java.lang.Exception ex) {
                     throw new IllegalStateException(ex.toString());
@@ -209,11 +209,12 @@ public class AlignmentDescriptor extends org.exolab.castor.xml.util.XMLClassDesc
         };
         desc.setHandler(handler);
         desc.setNameSpaceURI("http://www.vamsas.org");
-        desc.setMultivalued(false);
+        desc.setMultivalued(true);
         addFieldDescriptor(desc);
         
-        //-- validation code for: _alignmentAnnotations
+        //-- validation code for: _alignmentAnnotationsList
         fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        fieldValidator.setMinOccurs(0);
         { //-- local scope
         }
         desc.setValidator(fieldValidator);
@@ -284,7 +285,7 @@ public class AlignmentDescriptor extends org.exolab.castor.xml.util.XMLClassDesc
         
         //-- validation code for: _alignmentSequenceList
         fieldValidator = new org.exolab.castor.xml.FieldValidator();
-        fieldValidator.setMinOccurs(2);
+        fieldValidator.setMinOccurs(1);
         { //-- local scope
         }
         desc.setValidator(fieldValidator);