autogenerated java classes for current schema

[vamsas.git] / src / org / vamsas / objects / core / AnnotationElementDescriptor.java

diff --git a/src/org/vamsas/objects/core/AnnotationElementDescriptor.java b/src/org/vamsas/objects/core/AnnotationElementDescriptor.java
index 943bb99..cc7bb65 100644 (file)
--- a/src/org/vamsas/objects/core/AnnotationElementDescriptor.java
+++ b/src/org/vamsas/objects/core/AnnotationElementDescriptor.java
@@ -108,80 +108,84 @@ public class AnnotationElementDescriptor extends org.exolab.castor.xml.util.XMLC
             fieldValidator.setValidator(typeValidator);
         }
         desc.setValidator(fieldValidator);
-        //-- _id
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_id", "id", org.exolab.castor.xml.NodeType.Attribute);
-        this.identity = desc;
+        //-- _after
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_after", "after", org.exolab.castor.xml.NodeType.Attribute);
         handler = new org.exolab.castor.xml.XMLFieldHandler() {
             public java.lang.Object getValue( java.lang.Object object ) 
                 throws IllegalStateException
             {
                 AnnotationElement target = (AnnotationElement) object;
-                return target.getId();
+                if(!target.hasAfter())
+                    return null;
+                return (target.getAfter() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE);
             }
             public void setValue( java.lang.Object object, java.lang.Object value) 
                 throws IllegalStateException, IllegalArgumentException
             {
                 try {
                     AnnotationElement target = (AnnotationElement) object;
-                    target.setId( (java.lang.String) value);
+                    // if null, use delete method for optional primitives 
+                    if (value == null) {
+                        target.deleteAfter();
+                        return;
+                    }
+                    target.setAfter( ((java.lang.Boolean)value).booleanValue());
                 }
                 catch (java.lang.Exception ex) {
                     throw new IllegalStateException(ex.toString());
                 }
             }
             public java.lang.Object newInstance( java.lang.Object parent ) {
-                return new java.lang.String();
+                return null;
             }
         };
         desc.setHandler(handler);
         desc.setMultivalued(false);
         addFieldDescriptor(desc);
         
-        //-- validation code for: _id
+        //-- validation code for: _after
         fieldValidator = new org.exolab.castor.xml.FieldValidator();
         { //-- local scope
+            BooleanValidator typeValidator = new BooleanValidator();
+            fieldValidator.setValidator(typeValidator);
         }
         desc.setValidator(fieldValidator);
-        //-- initialize element descriptors
-        
-        //-- _displayCharacter
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_displayCharacter", "displayCharacter", org.exolab.castor.xml.NodeType.Element);
-        desc.setImmutable(true);
+        //-- _id
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_id", "id", org.exolab.castor.xml.NodeType.Attribute);
+        this.identity = desc;
         handler = new org.exolab.castor.xml.XMLFieldHandler() {
             public java.lang.Object getValue( java.lang.Object object ) 
                 throws IllegalStateException
             {
                 AnnotationElement target = (AnnotationElement) object;
-                return target.getDisplayCharacter();
+                return target.getId();
             }
             public void setValue( java.lang.Object object, java.lang.Object value) 
                 throws IllegalStateException, IllegalArgumentException
             {
                 try {
                     AnnotationElement target = (AnnotationElement) object;
-                    target.setDisplayCharacter( (java.lang.String) value);
+                    target.setId( (java.lang.String) value);
                 }
                 catch (java.lang.Exception ex) {
                     throw new IllegalStateException(ex.toString());
                 }
             }
             public java.lang.Object newInstance( java.lang.Object parent ) {
-                return null;
+                return new java.lang.String();
             }
         };
         desc.setHandler(handler);
-        desc.setNameSpaceURI("http://www.vamsas.org");
         desc.setMultivalued(false);
         addFieldDescriptor(desc);
         
-        //-- validation code for: _displayCharacter
+        //-- validation code for: _id
         fieldValidator = new org.exolab.castor.xml.FieldValidator();
         { //-- local scope
-            StringValidator typeValidator = new StringValidator();
-            typeValidator.setWhiteSpace("preserve");
-            fieldValidator.setValidator(typeValidator);
         }
         desc.setValidator(fieldValidator);
+        //-- initialize element descriptors
+        
         //-- _description
         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_description", "description", org.exolab.castor.xml.NodeType.Element);
         desc.setImmutable(true);
@@ -220,67 +224,59 @@ public class AnnotationElementDescriptor extends org.exolab.castor.xml.util.XMLC
             fieldValidator.setValidator(typeValidator);
         }
         desc.setValidator(fieldValidator);
-        //-- _secondaryStructure
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_secondaryStructure", "secondaryStructure", org.exolab.castor.xml.NodeType.Element);
-        desc.setImmutable(true);
+        //-- _glyphList
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(org.vamsas.objects.core.Glyph.class, "_glyphList", "glyph", org.exolab.castor.xml.NodeType.Element);
         handler = new org.exolab.castor.xml.XMLFieldHandler() {
             public java.lang.Object getValue( java.lang.Object object ) 
                 throws IllegalStateException
             {
                 AnnotationElement target = (AnnotationElement) object;
-                return target.getSecondaryStructure();
+                return target.getGlyph();
             }
             public void setValue( java.lang.Object object, java.lang.Object value) 
                 throws IllegalStateException, IllegalArgumentException
             {
                 try {
                     AnnotationElement target = (AnnotationElement) object;
-                    target.setSecondaryStructure( (java.lang.String) value);
+                    target.addGlyph( (org.vamsas.objects.core.Glyph) value);
                 }
                 catch (java.lang.Exception ex) {
                     throw new IllegalStateException(ex.toString());
                 }
             }
             public java.lang.Object newInstance( java.lang.Object parent ) {
-                return null;
+                return new org.vamsas.objects.core.Glyph();
             }
         };
         desc.setHandler(handler);
         desc.setNameSpaceURI("http://www.vamsas.org");
-        desc.setMultivalued(false);
+        desc.setMultivalued(true);
         addFieldDescriptor(desc);
         
-        //-- validation code for: _secondaryStructure
+        //-- validation code for: _glyphList
         fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        fieldValidator.setMinOccurs(0);
         { //-- local scope
-            StringValidator typeValidator = new StringValidator();
-            typeValidator.setLength(1);
-            typeValidator.setWhiteSpace("preserve");
-            fieldValidator.setValidator(typeValidator);
         }
         desc.setValidator(fieldValidator);
-        //-- _value
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(float.class, "_value", "value", org.exolab.castor.xml.NodeType.Element);
+        //-- _valueList
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(float.class, "_valueList", "value", org.exolab.castor.xml.NodeType.Element);
         handler = new org.exolab.castor.xml.XMLFieldHandler() {
             public java.lang.Object getValue( java.lang.Object object ) 
                 throws IllegalStateException
             {
                 AnnotationElement target = (AnnotationElement) object;
-                if(!target.hasValue())
-                    return null;
-                return new java.lang.Float(target.getValue());
+                return target.getValue();
             }
             public void setValue( java.lang.Object object, java.lang.Object value) 
                 throws IllegalStateException, IllegalArgumentException
             {
                 try {
                     AnnotationElement target = (AnnotationElement) object;
-                    // if null, use delete method for optional primitives 
-                    if (value == null) {
-                        target.deleteValue();
-                        return;
-                    }
-                    target.setValue( ((java.lang.Float)value).floatValue());
+                    // ignore null values for non optional primitives
+                    if (value == null) return;
+                    
+                    target.addValue( ((java.lang.Float)value).floatValue());
                 }
                 catch (java.lang.Exception ex) {
                     throw new IllegalStateException(ex.toString());
@@ -292,11 +288,12 @@ public class AnnotationElementDescriptor extends org.exolab.castor.xml.util.XMLC
         };
         desc.setHandler(handler);
         desc.setNameSpaceURI("http://www.vamsas.org");
-        desc.setMultivalued(false);
+        desc.setMultivalued(true);
         addFieldDescriptor(desc);
         
-        //-- validation code for: _value
+        //-- validation code for: _valueList
         fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        fieldValidator.setMinOccurs(0);
         { //-- local scope
             FloatValidator typeValidator = new FloatValidator();
             fieldValidator.setValidator(typeValidator);