removed after schema modification,

[vamsas.git] / src / org / vamsas / objects / core / TreeDescriptor.java

diff --git a/src/org/vamsas/objects/core/TreeDescriptor.java b/src/org/vamsas/objects/core/TreeDescriptor.java
index 0918e4e..a4c7d8d 100644 (file)
--- a/src/org/vamsas/objects/core/TreeDescriptor.java
+++ b/src/org/vamsas/objects/core/TreeDescriptor.java
@@ -1,6 +1,6 @@
 /*
  * This class was automatically generated with 
- * <a href="http://www.castor.org">Castor 0.9.9M1</a>, using an XML
+ * <a href="http://www.castor.org">Castor 0.9.9M2</a>, using an XML
  * Schema.
  * $Id$
  */
@@ -57,7 +57,7 @@ public class TreeDescriptor extends org.exolab.castor.xml.util.XMLClassDescripto
      {
         super();
         nsURI = "http://www.vamsas.org";
-        xmlName = "tree";
+        xmlName = "Tree";
         
         //-- set grouping compositor
         setCompositorAsSequence();
@@ -66,67 +66,138 @@ public class TreeDescriptor extends org.exolab.castor.xml.util.XMLClassDescripto
         org.exolab.castor.xml.FieldValidator               fieldValidator = null;
         //-- initialize attribute descriptors
         
+        //-- _id
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_id", "id", org.exolab.castor.xml.NodeType.Attribute);
+        this.identity = desc;
+        handler = new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                Tree target = (Tree) object;
+                return target.getId();
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    Tree target = (Tree) object;
+                    target.setId( (java.lang.String) value);
+                }
+                catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance( java.lang.Object parent ) {
+                return new java.lang.String();
+            }
+        };
+        desc.setHandler(handler);
+        desc.setMultivalued(false);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _id
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        { //-- local scope
+        }
+        desc.setValidator(fieldValidator);
         //-- initialize element descriptors
         
-        //-- _provenance
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(org.vamsas.objects.core.Provenance.class, "_provenance", "Provenance", org.exolab.castor.xml.NodeType.Element);
+        //-- _title
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_title", "title", org.exolab.castor.xml.NodeType.Element);
+        desc.setImmutable(true);
         handler = new org.exolab.castor.xml.XMLFieldHandler() {
             public java.lang.Object getValue( java.lang.Object object ) 
                 throws IllegalStateException
             {
                 Tree target = (Tree) object;
-                return target.getProvenance();
+                return target.getTitle();
             }
             public void setValue( java.lang.Object object, java.lang.Object value) 
                 throws IllegalStateException, IllegalArgumentException
             {
                 try {
                     Tree target = (Tree) object;
-                    target.setProvenance( (org.vamsas.objects.core.Provenance) value);
+                    target.setTitle( (java.lang.String) value);
                 }
                 catch (java.lang.Exception ex) {
                     throw new IllegalStateException(ex.toString());
                 }
             }
             public java.lang.Object newInstance( java.lang.Object parent ) {
-                return new org.vamsas.objects.core.Provenance();
+                return null;
             }
         };
         desc.setHandler(handler);
         desc.setNameSpaceURI("http://www.vamsas.org");
-        desc.setRequired(true);
         desc.setMultivalued(false);
         addFieldDescriptor(desc);
         
-        //-- validation code for: _provenance
+        //-- validation code for: _title
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        { //-- local scope
+            StringValidator typeValidator = new StringValidator();
+            typeValidator.setWhiteSpace("preserve");
+            fieldValidator.setValidator(typeValidator);
+        }
+        desc.setValidator(fieldValidator);
+        //-- _newickList
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(org.vamsas.objects.core.Newick.class, "_newickList", "newick", org.exolab.castor.xml.NodeType.Element);
+        handler = new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                Tree target = (Tree) object;
+                return target.getNewick();
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    Tree target = (Tree) object;
+                    target.addNewick( (org.vamsas.objects.core.Newick) value);
+                }
+                catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance( java.lang.Object parent ) {
+                return new org.vamsas.objects.core.Newick();
+            }
+        };
+        desc.setHandler(handler);
+        desc.setNameSpaceURI("http://www.vamsas.org");
+        desc.setRequired(true);
+        desc.setMultivalued(true);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _newickList
         fieldValidator = new org.exolab.castor.xml.FieldValidator();
         fieldValidator.setMinOccurs(1);
         { //-- local scope
         }
         desc.setValidator(fieldValidator);
-        //-- _newickFormat
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_newickFormat", "newickFormat", org.exolab.castor.xml.NodeType.Element);
-        desc.setImmutable(true);
+        //-- _provenance
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(org.vamsas.objects.core.Provenance.class, "_provenance", "Provenance", org.exolab.castor.xml.NodeType.Element);
         handler = new org.exolab.castor.xml.XMLFieldHandler() {
             public java.lang.Object getValue( java.lang.Object object ) 
                 throws IllegalStateException
             {
                 Tree target = (Tree) object;
-                return target.getNewickFormat();
+                return target.getProvenance();
             }
             public void setValue( java.lang.Object object, java.lang.Object value) 
                 throws IllegalStateException, IllegalArgumentException
             {
                 try {
                     Tree target = (Tree) object;
-                    target.setNewickFormat( (java.lang.String) value);
+                    target.setProvenance( (org.vamsas.objects.core.Provenance) value);
                 }
                 catch (java.lang.Exception ex) {
                     throw new IllegalStateException(ex.toString());
                 }
             }
             public java.lang.Object newInstance( java.lang.Object parent ) {
-                return null;
+                return new org.vamsas.objects.core.Provenance();
             }
         };
         desc.setHandler(handler);
@@ -135,13 +206,10 @@ public class TreeDescriptor extends org.exolab.castor.xml.util.XMLClassDescripto
         desc.setMultivalued(false);
         addFieldDescriptor(desc);
         
-        //-- validation code for: _newickFormat
+        //-- validation code for: _provenance
         fieldValidator = new org.exolab.castor.xml.FieldValidator();
         fieldValidator.setMinOccurs(1);
         { //-- local scope
-            StringValidator typeValidator = new StringValidator();
-            typeValidator.setWhiteSpace("preserve");
-            fieldValidator.setValidator(typeValidator);
         }
         desc.setValidator(fieldValidator);
     } //-- org.vamsas.objects.core.TreeDescriptor()