boolean val=true;
if (al!=null && al.length>0) {
for (int i=0; i<al.length; i++) {
- outstr.println("Alignment "+i);
+ outstr.println("Alignment "+i+(al[i].isRegistered() ? " ("+al[i].getVorbaId()+")" : " (unregistered)"));
if (cascade)
reportProvenance(al[i].getProvenance(), outstr);
outstr.println("Involves "+al[i].getAlignmentSequenceCount()+" sequences, has "