import static org.testng.AssertJUnit.assertSame;
import static org.testng.AssertJUnit.assertTrue;
+import jalview.gui.JvOptionPane;
+
import org.testng.Assert;
+import org.testng.annotations.BeforeClass;
import org.testng.annotations.DataProvider;
import org.testng.annotations.Test;
public class IdentifyFileTest
{
+ @BeforeClass(alwaysRun = true)
+ public void setUpJvOptionPane()
+ {
+ JvOptionPane.setInteractiveMode(false);
+ JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
+ }
+
@Test(groups = { "Functional" }, dataProvider = "identifyFiles")
public void testIdentify(String data, FileFormatI expectedFileType)
throws FileFormatException
{ "examples/plantfdx.fa", FileFormat.Fasta },
{ "examples/dna_interleaved.phy", FileFormat.Phylip },
{ "examples/2GIS.pdb", FileFormat.PDB },
- { "examples/rf00031_folded.stk", FileFormat.Stockholm },
+ { "examples/RF00031_folded.stk", FileFormat.Stockholm },
{ "examples/testdata/test.rnaml", FileFormat.Rnaml },
{ "examples/testdata/test.aln", FileFormat.Clustal },
{ "examples/testdata/test.pfam", FileFormat.Pfam },
{
"examples/testdata/cullpdb_pc25_res3.0_R0.3_d150729_chains9361.fasta.15316",
FileFormat.Fasta },
-
+ { "resources/scoreModel/pam250.scm", FileFormat.ScoreMatrix },
+ { "resources/scoreModel/blosum80.scm", FileFormat.ScoreMatrix }
// { "examples/testdata/test.amsa", "AMSA" },
// { "examples/test.jnet", "JnetFile" },
};