import org.testng.annotations.Test;
import jalview.api.AlignViewportI;
-import jalview.bin.Cache;
+import jalview.bin.Console;
import jalview.commands.EditCommand;
import jalview.commands.EditCommand.Action;
import jalview.commands.EditCommand.Edit;
@BeforeClass(alwaysRun = true)
public void setUp()
{
- Cache.initLogger();
+ Console.initLogger();
}
@BeforeClass(alwaysRun = true)
overlap = MappingUtils.findOverlap(ranges, 13, 15);
assertNull(overlap);
}
-
+
/**
* Test mapping a sequence group where sequences in and outside the group
* share a dataset sequence (e.g. alternative CDS for the same gene)
* <p>
- * This scenario doesn't arise after JAL-3763 changes, but test left as still valid
+ * This scenario doesn't arise after JAL-3763 changes, but test left as still
+ * valid
+ *
* @throws IOException
*/
@Test(groups = { "Functional" })