Cache.applicationProperties.setProperty("ADD_SS_ANN",
Boolean.TRUE.toString());
- sf = new SequenceFetcher(false);
+ sf = new SequenceFetcher();
}
/**
private void testRetrieveProteinSeqFromPDB() throws Exception
{
List<DbSourceProxy> sps = sf.getSourceProxy("PDB");
+ StringBuilder errors = new StringBuilder();
for (TestRetrieveObject str : toRetrieve)
{
AlignmentI response = sps.get(0).getSequenceRecords(str.id);
lastp = sq.findPosition(col - 1);
}
}
- if (errors.length() > 0)
- {
- Assert.fail(errors.toString());
- }
}
}
+ if (errors.length() > 0)
+ {
+ Assert.fail(errors.toString());
+ }
}
}