"Type of the sequence (PROTEIN or DNA)");\r
// TODO publish help on a compbio web site\r
\r
- p1.setFurtherDetails(new URL("http",\r
- "www.compbio.dundee.ac.uk/users/pvtroshin/ws/",\r
- "Index.html"));\r
+ p1.setFurtherDetails("http://www.compbio.dundee.ac.uk/users/pvtroshin/ws/Index.html");\r
p1.addPossibleValues("PROTEIN", "DNA");\r
p1.setOptionName("-TYPE");\r
p1.setRequired(false);\r
"Protein weight matrix");\r
// TODO publish help on a compbio web site\r
\r
- p2.setFurtherDetails(new URL("http",\r
- "www.compbio.dundee.ac.uk/users/pvtroshin/ws/",\r
- "Index.html"));\r
+ p2.setFurtherDetails("http://www.compbio.dundee.ac.uk/users/pvtroshin/ws/Index.html");\r
\r
p2.addOptionNames("-jtree"); // "-retree"\r
p2.setRequired(false);\r
Parameter<Mafft> p3 = new Parameter<Mafft>("Matrix1",\r
"Protein weight matrix");\r
// TODO publish help on a compbio web site\r
- p3.setFurtherDetails(new URL("http",\r
- "www.compbio.dundee.ac.uk/users/pvtroshin/ws/",\r
- "Index.html"));\r
+ p3.setFurtherDetails("http://www.compbio.dundee.ac.uk/users/pvtroshin/ws/Index.html");\r
\r
p3.addPossibleValues("BLOSUM", "PAM", "GONNET", "ID");\r
// This attribute is required by strict schema\r