fix jabaws download link
[jabaws.git] / webservices / compbio / stat / servlet / StatisticCollector.java
index 3ababa3..91eed46 100644 (file)
+/* Copyright (c) 2011 Peter Troshin\r
+ *  \r
+ *  JAva Bioinformatics Analysis Web Services (JABAWS) @version: 2.0     \r
+ * \r
+ *  This library is free software; you can redistribute it and/or modify it under the terms of the\r
+ *  Apache License version 2 as published by the Apache Software Foundation\r
+ * \r
+ *  This library is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without\r
+ *  even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the Apache \r
+ *  License for more details.\r
+ * \r
+ *  A copy of the license is in apache_license.txt. It is also available here:\r
+ * @see: http://www.apache.org/licenses/LICENSE-2.0.txt\r
+ * \r
+ * Any republication or derived work distributed in source code form\r
+ * must include this copyright and license notice.\r
+ */\r
 package compbio.stat.servlet;\r
 \r
+import java.util.concurrent.Executors;\r
+import java.util.concurrent.ScheduledExecutorService;\r
+import java.util.concurrent.ScheduledFuture;\r
+import java.util.concurrent.TimeUnit;\r
+\r
 import javax.servlet.ServletContextEvent;\r
 import javax.servlet.ServletContextListener;\r
 \r
+import org.apache.log4j.Logger;\r
+\r
+import compbio.engine.conf.PropertyHelperManager;\r
+import compbio.stat.collector.ExecutionStatCollector;\r
+import compbio.stat.collector.StatDB;\r
+import compbio.util.PropertyHelper;\r
+import compbio.util.Util;\r
+\r
 public class StatisticCollector implements ServletContextListener {\r
 \r
+       static PropertyHelper ph = PropertyHelperManager.getPropertyHelper();\r
+\r
+       private final Logger log = Logger.getLogger(StatisticCollector.class);\r
+\r
+       private ScheduledFuture<?> localcf;\r
+       private ScheduledFuture<?> clustercf;\r
+       private ScheduledExecutorService executor;\r
+\r
        @Override\r
        public void contextDestroyed(ServletContextEvent arg0) {\r
-               // TODO Auto-generated method stub\r
-\r
+               try {\r
+                       if (localcf != null) {\r
+                               localcf.cancel(true);\r
+                       }\r
+                       if (clustercf != null) {\r
+                               clustercf.cancel(true);\r
+                       }\r
+                       executor.shutdown();\r
+                       executor.awaitTermination(3, TimeUnit.SECONDS);\r
+               } catch (InterruptedException e) {\r
+                       log.warn(e.getMessage(), e);\r
+               } finally {\r
+                       StatDB.shutdownDBServer();\r
+                       executor.shutdownNow();\r
+               }\r
        }\r
 \r
        @Override\r
        public void contextInitialized(ServletContextEvent arg0) {\r
-               // TODO Auto-generated method stub\r
+               String clusterWorkDir = getClusterJobDir();\r
+               int clusterMaxRuntime = getClusterJobTimeOut();\r
+\r
+               int localMaxRuntime = getLocalJobTimeOut();\r
+               String localWorkDir = compbio.engine.client.Util\r
+                               .convertToAbsolute(getLocalJobDir());\r
+\r
+               log.info("Initializing statistics collector");\r
+               executor = Executors.newScheduledThreadPool(2);\r
+\r
+               if (collectClusterStats()) {\r
+\r
+                       ExecutionStatCollector clusterCollector = new ExecutionStatCollector(\r
+                                       clusterWorkDir, clusterMaxRuntime);\r
+                       clustercf = executor.scheduleAtFixedRate(clusterCollector, 60,\r
+                                       24 * 60, TimeUnit.MINUTES);\r
+                       // clustercf = executor.scheduleAtFixedRate(clusterCollector, 15,\r
+                       // 30,\r
+                       // TimeUnit.SECONDS);\r
+                       log.info("Collecting cluster statistics ");\r
+               } else {\r
+                       log.info("Cluster statistics collector is disabled or not configured! ");\r
+               }\r
+               if (collectLocalStats()) {\r
+                       ExecutionStatCollector localCollector = new ExecutionStatCollector(\r
+                                       localWorkDir, localMaxRuntime);\r
+                       // localcf = executor.scheduleAtFixedRate(localCollector, 100, 60,\r
+                       // TimeUnit.SECONDS);\r
+\r
+                       localcf = executor.scheduleAtFixedRate(localCollector, 10, 24 * 60,\r
+                                       TimeUnit.MINUTES);\r
+                       log.info("Collecting local statistics ");\r
+               } else {\r
+                       log.info("Local statistics collector is disabled or not configured! ");\r
+               }\r
+       }\r
+\r
+       static String getClusterJobDir() {\r
+               return getStringProperty(ph.getProperty("cluster.tmp.directory"));\r
+       }\r
+\r
+       static int getClusterJobTimeOut() {\r
+               int maxRunTime = 24 * 7;\r
+               String clusterMaxRuntime = ph.getProperty("cluster.stat.maxruntime");\r
+               if (clusterMaxRuntime != null) {\r
+                       clusterMaxRuntime = clusterMaxRuntime.trim();\r
+                       maxRunTime = Integer.parseInt(clusterMaxRuntime);\r
+               }\r
+               return maxRunTime;\r
+       }\r
+\r
+       static int getLocalJobTimeOut() {\r
+               int maxRunTime = 24;\r
+               String localMaxRuntime = ph.getProperty("local.stat.maxruntime");\r
+               if (localMaxRuntime != null) {\r
+                       localMaxRuntime = localMaxRuntime.trim();\r
+                       maxRunTime = Integer.parseInt(localMaxRuntime);\r
+               }\r
+\r
+               return maxRunTime;\r
+       }\r
+\r
+       static String getLocalJobDir() {\r
+               return getStringProperty(ph.getProperty("local.tmp.directory"));\r
+       }\r
+\r
+       private static String getStringProperty(String propName) {\r
+               if (propName != null) {\r
+                       propName = propName.trim();\r
+               }\r
+               return propName;\r
+       }\r
+\r
+       static boolean collectClusterStats() {\r
+               return getBooleanProperty(ph\r
+                               .getProperty("cluster.stat.collector.enable"));\r
+       }\r
+\r
+       static boolean collectLocalStats() {\r
+               return getBooleanProperty(ph.getProperty("local.stat.collector.enable"));\r
+       }\r
 \r
+       private static boolean getBooleanProperty(String propValue) {\r
+               boolean enabled = false;\r
+               if (!Util.isEmpty(propValue)) {\r
+                       propValue = propValue.trim();\r
+                       enabled = Boolean.parseBoolean(propValue);\r
+               }\r
+               return enabled;\r
        }\r
 \r
 }\r