jobId = wsproxy.analize(fastalist);\r
}\r
System.out.println("\n\rcalling predictor.........");\r
- Thread.sleep(100);\r
+ Thread.sleep(1000);\r
+ /*\r
JobStatus status = wsproxy.getJobStatus(jobId);\r
System.out.println("\njob " + jobId + " status: " + status);\r
+ */\r
scores = wsproxy.getAnnotation(jobId);\r
} catch (JobSubmissionException e) {\r
System.err.println("Exception while submitting job to a web server. Exception details are below:");\r
jobId = msaws.align(fastalist);\r
}\r
System.out.println("\ncalling program.........");\r
+ /*\r
long startTime = System.nanoTime();\r
while (JobStatus.RUNNING == msaws.getJobStatus(jobId)) {\r
Thread.sleep(1000);\r
long endTime = System.nanoTime();\r
System.out.println("job " + jobId + " time executing: "+ (endTime - startTime) / 1000000 +" msec, status: " + msaws.getJobStatus(jobId));\r
}\r
+ */\r
+ Thread.sleep(1000);\r
alignment = msaws.getResult(jobId);\r
} catch (IOException e) {\r
System.err.println("Exception while reading the input file. Check that the input file is a FASTA file! "\r