<xs:element name="description" type="xs:string"/>
<xs:element name="optionNames" type="xs:string" maxOccurs="unbounded"/>
<xs:element name="name" type="xs:string"/>
- <xs:element name="furtherDetails" type="xs:anyURI" minOccurs="0"/>
+ <xs:element name="furtherDetails" type="xs:string" minOccurs="0"/>
<xs:element name="defaultValue" type="xs:string" minOccurs="0"/>
</xs:sequence>
<xs:attribute name="isRequired" type="xs:boolean" use="required"/>
</xs:sequence>
</xs:complexType>
- <xs:complexType name="alignment" final="extension restriction">
+ <xs:complexType name="alignment">
<xs:sequence>
<xs:element name="metadata" type="tns:alignmentMetadata" minOccurs="0"/>
<xs:element name="sequences" type="tns:fastaSequence" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
</xs:sequence>
</xs:complexType>
- <xs:complexType name="ResultNotAvailableException">
- <xs:sequence>
- <xs:element name="message" type="xs:string" minOccurs="0"/>
- </xs:sequence>
- </xs:complexType>
-
- <xs:complexType name="getLimits">
- <xs:sequence/>
- </xs:complexType>
-
- <xs:complexType name="getLimitsResponse">
- <xs:sequence>
- <xs:element name="return" type="tns:limitsManager" minOccurs="0"/>
- </xs:sequence>
- </xs:complexType>
-
- <xs:complexType name="limitsManager">
- <xs:sequence>
- <xs:element name="runnerClassName" type="xs:string" minOccurs="0"/>
- <xs:element name="limit" type="tns:limit" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
- </xs:sequence>
+ <xs:complexType name="jpredAlignment">
+ <xs:complexContent>
+ <xs:extension base="tns:alignment">
+ <xs:sequence/>
+ </xs:extension>
+ </xs:complexContent>
</xs:complexType>
- <xs:complexType name="limit">
+ <xs:complexType name="ResultNotAvailableException">
<xs:sequence>
- <xs:element name="preset" type="xs:string" minOccurs="0"/>
- <xs:element name="seqNumber" type="xs:int"/>
- <xs:element name="seqLength" type="xs:int"/>
+ <xs:element name="message" type="xs:string" minOccurs="0"/>
</xs:sequence>
- <xs:attribute name="isDefault" type="xs:boolean" use="required"/>
</xs:complexType>
<xs:complexType name="getPresets">
</xs:sequence>
</xs:complexType>
+ <xs:complexType name="getLimits">
+ <xs:sequence/>
+ </xs:complexType>
+
+ <xs:complexType name="getLimitsResponse">
+ <xs:sequence>
+ <xs:element name="return" type="tns:limitsManager" minOccurs="0"/>
+ </xs:sequence>
+ </xs:complexType>
+
+ <xs:complexType name="limitsManager">
+ <xs:sequence>
+ <xs:element name="runnerClassName" type="xs:string" minOccurs="0"/>
+ <xs:element name="limit" type="tns:limit" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
+ </xs:sequence>
+ </xs:complexType>
+
+ <xs:complexType name="limit">
+ <xs:sequence>
+ <xs:element name="preset" type="xs:string" minOccurs="0"/>
+ <xs:element name="seqNumber" type="xs:int"/>
+ <xs:element name="seqLength" type="xs:int"/>
+ </xs:sequence>
+ <xs:attribute name="isDefault" type="xs:boolean" use="required"/>
+ </xs:complexType>
+
<xs:complexType name="getLimit">
<xs:sequence>
<xs:element name="presetName" type="xs:string" minOccurs="0"/>
<xs:simpleType name="program">
<xs:restriction base="xs:string">
<xs:enumeration value="CLUSTAL"/>
- <xs:enumeration value="MAFFT"/>
- <xs:enumeration value="MUSCLE"/>
+ <xs:enumeration value="ClustalO"/>
+ <xs:enumeration value="Mafft"/>
+ <xs:enumeration value="Muscle"/>
<xs:enumeration value="Tcoffee"/>
<xs:enumeration value="Probcons"/>
+ <xs:enumeration value="MSAprobs"/>
+ <xs:enumeration value="GLprobs"/>
+ <xs:enumeration value="Jpred"/>
</xs:restriction>
</xs:simpleType>
</xs:schema>