<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<!-- Generated by JAX-WS RI at http://jax-ws.dev.java.net. RI's version is Metro/2.1 (branches/2.1-6728; 2011-02-03T14:14:58+0000) JAXWS-RI/2.2.3 JAXWS/2.2. -->
<definitions targetNamespace="http://msa.data.compbio/01/12/2010/" name="JpredWS" xmlns="http://schemas.xmlsoap.org/wsdl/" xmlns:wsp="http://www.w3.org/ns/ws-policy" xmlns:tns="http://msa.data.compbio/01/12/2010/" xmlns:xsd="http://www.w3.org/2001/XMLSchema" xmlns:wsp1_2="http://schemas.xmlsoap.org/ws/2004/09/policy" xmlns:soap="http://schemas.xmlsoap.org/wsdl/soap/" xmlns:wsam="http://www.w3.org/2007/05/addressing/metadata" xmlns:wsu="http://docs.oasis-open.org/wss/2004/01/oasis-200401-wss-wssecurity-utility-1.0.xsd">
- <types>
- <xsd:schema>
- <xsd:import namespace="http://msa.data.compbio/01/12/2010/" schemaLocation="JpredWS_schema1.xsd"/>
- </xsd:schema>
- </types>
- <message name="getAnnotation">
- <part name="parameters" element="tns:getAnnotation"/>
- </message>
- <message name="getAnnotationResponse">
- <part name="parameters" element="tns:getAnnotationResponse"/>
- </message>
- <message name="ResultNotAvailableException">
- <part name="fault" element="tns:ResultNotAvailableException"/>
- </message>
- <message name="analize">
- <part name="parameters" element="tns:analize"/>
- </message>
- <message name="analizeResponse">
- <part name="parameters" element="tns:analizeResponse"/>
- </message>
- <message name="UnsupportedRuntimeException">
- <part name="fault" element="tns:UnsupportedRuntimeException"/>
- </message>
- <message name="LimitExceededException">
- <part name="fault" element="tns:LimitExceededException"/>
- </message>
- <message name="JobSubmissionException">
- <part name="fault" element="tns:JobSubmissionException"/>
- </message>
- <message name="customAnalize">
- <part name="parameters" element="tns:customAnalize"/>
- </message>
- <message name="customAnalizeResponse">
- <part name="parameters" element="tns:customAnalizeResponse"/>
- </message>
- <message name="WrongParameterException">
- <part name="fault" element="tns:WrongParameterException"/>
- </message>
- <message name="presetAnalize">
- <part name="parameters" element="tns:presetAnalize"/>
- </message>
- <message name="presetAnalizeResponse">
- <part name="parameters" element="tns:presetAnalizeResponse"/>
- </message>
- <message name="pullExecStatistics">
- <part name="parameters" element="tns:pullExecStatistics"/>
- </message>
- <message name="pullExecStatisticsResponse">
- <part name="parameters" element="tns:pullExecStatisticsResponse"/>
- </message>
- <message name="cancelJob">
- <part name="parameters" element="tns:cancelJob"/>
- </message>
- <message name="cancelJobResponse">
- <part name="parameters" element="tns:cancelJobResponse"/>
- </message>
- <message name="getJobStatus">
- <part name="parameters" element="tns:getJobStatus"/>
- </message>
- <message name="getJobStatusResponse">
- <part name="parameters" element="tns:getJobStatusResponse"/>
- </message>
- <message name="getLimit">
- <part name="parameters" element="tns:getLimit"/>
- </message>
- <message name="getLimitResponse">
- <part name="parameters" element="tns:getLimitResponse"/>
- </message>
- <message name="getRunnerOptions">
- <part name="parameters" element="tns:getRunnerOptions"/>
- </message>
- <message name="getRunnerOptionsResponse">
- <part name="parameters" element="tns:getRunnerOptionsResponse"/>
- </message>
- <message name="getPresets">
- <part name="parameters" element="tns:getPresets"/>
- </message>
- <message name="getPresetsResponse">
- <part name="parameters" element="tns:getPresetsResponse"/>
- </message>
- <message name="getLimits">
- <part name="parameters" element="tns:getLimits"/>
- </message>
- <message name="getLimitsResponse">
- <part name="parameters" element="tns:getLimitsResponse"/>
- </message>
- <portType name="SequenceAnnotation">
- <operation name="getAnnotation">
- <input wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/getAnnotationRequest" message="tns:getAnnotation"/>
- <output wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/getAnnotationResponse" message="tns:getAnnotationResponse"/>
- <fault message="tns:ResultNotAvailableException" name="ResultNotAvailableException" wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/getAnnotation/Fault/ResultNotAvailableException"/>
- </operation>
- <operation name="analize">
- <input wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/analizeRequest" message="tns:analize"/>
- <output wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/analizeResponse" message="tns:analizeResponse"/>
- <fault message="tns:UnsupportedRuntimeException" name="UnsupportedRuntimeException" wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/analize/Fault/UnsupportedRuntimeException"/>
- <fault message="tns:LimitExceededException" name="LimitExceededException" wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/analize/Fault/LimitExceededException"/>
- <fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/analize/Fault/JobSubmissionException"/>
- </operation>
- <operation name="customAnalize">
- <input wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/customAnalizeRequest" message="tns:customAnalize"/>
- <output wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/customAnalizeResponse" message="tns:customAnalizeResponse"/>
- <fault message="tns:UnsupportedRuntimeException" name="UnsupportedRuntimeException" wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/customAnalize/Fault/UnsupportedRuntimeException"/>
- <fault message="tns:LimitExceededException" name="LimitExceededException" wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/customAnalize/Fault/LimitExceededException"/>
- <fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/customAnalize/Fault/JobSubmissionException"/>
- <fault message="tns:WrongParameterException" name="WrongParameterException" wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/customAnalize/Fault/WrongParameterException"/>
- </operation>
- <operation name="presetAnalize">
- <input wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/presetAnalizeRequest" message="tns:presetAnalize"/>
- <output wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/presetAnalizeResponse" message="tns:presetAnalizeResponse"/>
- <fault message="tns:UnsupportedRuntimeException" name="UnsupportedRuntimeException" wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/presetAnalize/Fault/UnsupportedRuntimeException"/>
- <fault message="tns:LimitExceededException" name="LimitExceededException" wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/presetAnalize/Fault/LimitExceededException"/>
- <fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/presetAnalize/Fault/JobSubmissionException"/>
- <fault message="tns:WrongParameterException" name="WrongParameterException" wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/presetAnalize/Fault/WrongParameterException"/>
- </operation>
- <operation name="pullExecStatistics">
- <input wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/pullExecStatisticsRequest" message="tns:pullExecStatistics"/>
- <output wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/pullExecStatisticsResponse" message="tns:pullExecStatisticsResponse"/>
- </operation>
- <operation name="cancelJob">
- <input wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/cancelJobRequest" message="tns:cancelJob"/>
- <output wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/cancelJobResponse" message="tns:cancelJobResponse"/>
- </operation>
- <operation name="getJobStatus">
- <input wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/getJobStatusRequest" message="tns:getJobStatus"/>
- <output wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/getJobStatusResponse" message="tns:getJobStatusResponse"/>
- </operation>
- <operation name="getLimit">
- <input wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/getLimitRequest" message="tns:getLimit"/>
- <output wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/getLimitResponse" message="tns:getLimitResponse"/>
- </operation>
- <operation name="getRunnerOptions">
- <input wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/getRunnerOptionsRequest" message="tns:getRunnerOptions"/>
- <output wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/getRunnerOptionsResponse" message="tns:getRunnerOptionsResponse"/>
- </operation>
- <operation name="getPresets">
- <input wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/getPresetsRequest" message="tns:getPresets"/>
- <output wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/getPresetsResponse" message="tns:getPresetsResponse"/>
- </operation>
- <operation name="getLimits">
- <input wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/getLimitsRequest" message="tns:getLimits"/>
- <output wsam:Action="http://msa.data.compbio/01/12/2010/SequenceAnnotation/getLimitsResponse" message="tns:getLimitsResponse"/>
- </operation>
- </portType>
- <binding name="JpredWSPortBinding" type="tns:SequenceAnnotation">
+ <import namespace="http://msa.data.compbio/01/01/2010/" location="MsaWS.wsdl"/>
+ <binding name="JpredWSPortBinding" type="ns1:MsaWS" xmlns:ns1="http://msa.data.compbio/01/01/2010/">
<soap:binding transport="http://schemas.xmlsoap.org/soap/http" style="document"/>
- <operation name="getAnnotation">
- <soap:operation soapAction=""/>
- <input>
- <soap:body use="literal"/>
- </input>
- <output>
- <soap:body use="literal"/>
- </output>
- <fault name="ResultNotAvailableException">
- <soap:fault name="ResultNotAvailableException" use="literal"/>
- </fault>
- </operation>
- <operation name="analize">
+ <operation name="align">
<soap:operation soapAction=""/>
<input>
<soap:body use="literal"/>
<soap:fault name="JobSubmissionException" use="literal"/>
</fault>
</operation>
- <operation name="customAnalize">
+ <operation name="presetAlign">
<soap:operation soapAction=""/>
<input>
<soap:body use="literal"/>
<soap:fault name="WrongParameterException" use="literal"/>
</fault>
</operation>
- <operation name="presetAnalize">
+ <operation name="customAlign">
<soap:operation soapAction=""/>
<input>
<soap:body use="literal"/>
<soap:fault name="WrongParameterException" use="literal"/>
</fault>
</operation>
- <operation name="pullExecStatistics">
+ <operation name="getResult">
<soap:operation soapAction=""/>
<input>
<soap:body use="literal"/>
<output>
<soap:body use="literal"/>
</output>
+ <fault name="ResultNotAvailableException">
+ <soap:fault name="ResultNotAvailableException" use="literal"/>
+ </fault>
</operation>
<operation name="cancelJob">
<soap:operation soapAction=""/>
<soap:body use="literal"/>
</output>
</operation>
- <operation name="getLimit">
+ <operation name="pullExecStatistics">
<soap:operation soapAction=""/>
<input>
<soap:body use="literal"/>
<soap:body use="literal"/>
</output>
</operation>
- <operation name="getPresets">
+ <operation name="getLimit">
<soap:operation soapAction=""/>
<input>
<soap:body use="literal"/>
<soap:body use="literal"/>
</output>
</operation>
+ <operation name="getPresets">
+ <soap:operation soapAction=""/>
+ <input>
+ <soap:body use="literal"/>
+ </input>
+ <output>
+ <soap:body use="literal"/>
+ </output>
+ </operation>
</binding>
<service name="JpredWS">
<port name="JpredWSPort" binding="tns:JpredWSPortBinding">