<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
-<!-- Generated by JAX-WS RI at http://jax-ws.dev.java.net. RI's version is JAX-WS RI 2.2.1-hudson-28-. -->
+<!-- Generated by JAX-WS RI at http://jax-ws.dev.java.net. RI's version is Metro/2.1 (branches/2.1-6728; 2011-02-03T14:14:58+0000) JAXWS-RI/2.2.3 JAXWS/2.2. -->
<definitions targetNamespace="http://msa.data.compbio/01/01/2010/" name="TcoffeeWS" xmlns="http://schemas.xmlsoap.org/wsdl/" xmlns:wsp="http://www.w3.org/ns/ws-policy" xmlns:tns="http://msa.data.compbio/01/01/2010/" xmlns:xsd="http://www.w3.org/2001/XMLSchema" xmlns:wsp1_2="http://schemas.xmlsoap.org/ws/2004/09/policy" xmlns:soap="http://schemas.xmlsoap.org/wsdl/soap/" xmlns:wsam="http://www.w3.org/2007/05/addressing/metadata" xmlns:wsu="http://docs.oasis-open.org/wss/2004/01/oasis-200401-wss-wssecurity-utility-1.0.xsd">
<types>
<xsd:schema>
<xsd:import namespace="http://msa.data.compbio/01/01/2010/" schemaLocation="TcoffeeWS_schema1.xsd"/>
</xsd:schema>
</types>
- <message name="getPresets">
- <part name="parameters" element="tns:getPresets"/>
- </message>
- <message name="getPresetsResponse">
- <part name="parameters" element="tns:getPresetsResponse"/>
+ <message name="getResult">
+ <part name="parameters" element="tns:getResult"/>
</message>
- <message name="getLimit">
- <part name="parameters" element="tns:getLimit"/>
+ <message name="getResultResponse">
+ <part name="parameters" element="tns:getResultResponse"/>
</message>
- <message name="getLimitResponse">
- <part name="parameters" element="tns:getLimitResponse"/>
+ <message name="ResultNotAvailableException">
+ <part name="fault" element="tns:ResultNotAvailableException"/>
</message>
- <message name="presetAlign">
- <part name="parameters" element="tns:presetAlign"/>
+ <message name="align">
+ <part name="parameters" element="tns:align"/>
</message>
- <message name="presetAlignResponse">
- <part name="parameters" element="tns:presetAlignResponse"/>
+ <message name="alignResponse">
+ <part name="parameters" element="tns:alignResponse"/>
</message>
<message name="UnsupportedRuntimeException">
<part name="fault" element="tns:UnsupportedRuntimeException"/>
<message name="JobSubmissionException">
<part name="fault" element="tns:JobSubmissionException"/>
</message>
- <message name="WrongParameterException">
- <part name="fault" element="tns:WrongParameterException"/>
- </message>
<message name="customAlign">
<part name="parameters" element="tns:customAlign"/>
</message>
<message name="customAlignResponse">
<part name="parameters" element="tns:customAlignResponse"/>
</message>
- <message name="getRunnerOptions">
- <part name="parameters" element="tns:getRunnerOptions"/>
- </message>
- <message name="getRunnerOptionsResponse">
- <part name="parameters" element="tns:getRunnerOptionsResponse"/>
- </message>
- <message name="getResult">
- <part name="parameters" element="tns:getResult"/>
- </message>
- <message name="getResultResponse">
- <part name="parameters" element="tns:getResultResponse"/>
- </message>
- <message name="ResultNotAvailableException">
- <part name="fault" element="tns:ResultNotAvailableException"/>
+ <message name="WrongParameterException">
+ <part name="fault" element="tns:WrongParameterException"/>
</message>
- <message name="getLimits">
- <part name="parameters" element="tns:getLimits"/>
+ <message name="presetAlign">
+ <part name="parameters" element="tns:presetAlign"/>
</message>
- <message name="getLimitsResponse">
- <part name="parameters" element="tns:getLimitsResponse"/>
+ <message name="presetAlignResponse">
+ <part name="parameters" element="tns:presetAlignResponse"/>
</message>
<message name="cancelJob">
<part name="parameters" element="tns:cancelJob"/>
<message name="cancelJobResponse">
<part name="parameters" element="tns:cancelJobResponse"/>
</message>
+ <message name="pullExecStatistics">
+ <part name="parameters" element="tns:pullExecStatistics"/>
+ </message>
+ <message name="pullExecStatisticsResponse">
+ <part name="parameters" element="tns:pullExecStatisticsResponse"/>
+ </message>
<message name="getJobStatus">
<part name="parameters" element="tns:getJobStatus"/>
</message>
<message name="getJobStatusResponse">
<part name="parameters" element="tns:getJobStatusResponse"/>
</message>
- <message name="pullExecStatistics">
- <part name="parameters" element="tns:pullExecStatistics"/>
+ <message name="getLimit">
+ <part name="parameters" element="tns:getLimit"/>
</message>
- <message name="pullExecStatisticsResponse">
- <part name="parameters" element="tns:pullExecStatisticsResponse"/>
+ <message name="getLimitResponse">
+ <part name="parameters" element="tns:getLimitResponse"/>
</message>
- <message name="align">
- <part name="parameters" element="tns:align"/>
+ <message name="getLimits">
+ <part name="parameters" element="tns:getLimits"/>
</message>
- <message name="alignResponse">
- <part name="parameters" element="tns:alignResponse"/>
+ <message name="getLimitsResponse">
+ <part name="parameters" element="tns:getLimitsResponse"/>
+ </message>
+ <message name="getPresets">
+ <part name="parameters" element="tns:getPresets"/>
+ </message>
+ <message name="getPresetsResponse">
+ <part name="parameters" element="tns:getPresetsResponse"/>
+ </message>
+ <message name="getRunnerOptions">
+ <part name="parameters" element="tns:getRunnerOptions"/>
+ </message>
+ <message name="getRunnerOptionsResponse">
+ <part name="parameters" element="tns:getRunnerOptionsResponse"/>
</message>
<portType name="MsaWS">
- <operation name="getPresets">
- <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getPresetsRequest" message="tns:getPresets"/>
- <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getPresetsResponse" message="tns:getPresetsResponse"/>
- </operation>
- <operation name="getLimit">
- <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitRequest" message="tns:getLimit"/>
- <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitResponse" message="tns:getLimitResponse"/>
+ <operation name="getResult">
+ <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getResultRequest" message="tns:getResult"/>
+ <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getResultResponse" message="tns:getResultResponse"/>
+ <fault message="tns:ResultNotAvailableException" name="ResultNotAvailableException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getResult/Fault/ResultNotAvailableException"/>
</operation>
- <operation name="presetAlign">
- <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlignRequest" message="tns:presetAlign"/>
- <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlignResponse" message="tns:presetAlignResponse"/>
- <fault message="tns:UnsupportedRuntimeException" name="UnsupportedRuntimeException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/UnsupportedRuntimeException"/>
- <fault message="tns:LimitExceededException" name="LimitExceededException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/LimitExceededException"/>
- <fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/JobSubmissionException"/>
- <fault message="tns:WrongParameterException" name="WrongParameterException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/WrongParameterException"/>
+ <operation name="align">
+ <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/alignRequest" message="tns:align"/>
+ <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/alignResponse" message="tns:alignResponse"/>
+ <fault message="tns:UnsupportedRuntimeException" name="UnsupportedRuntimeException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/UnsupportedRuntimeException"/>
+ <fault message="tns:LimitExceededException" name="LimitExceededException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/LimitExceededException"/>
+ <fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/JobSubmissionException"/>
</operation>
<operation name="customAlign">
<input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/customAlignRequest" message="tns:customAlign"/>
<fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/customAlign/Fault/JobSubmissionException"/>
<fault message="tns:WrongParameterException" name="WrongParameterException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/customAlign/Fault/WrongParameterException"/>
</operation>
- <operation name="getRunnerOptions">
- <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getRunnerOptionsRequest" message="tns:getRunnerOptions"/>
- <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getRunnerOptionsResponse" message="tns:getRunnerOptionsResponse"/>
- </operation>
- <operation name="getResult">
- <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getResultRequest" message="tns:getResult"/>
- <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getResultResponse" message="tns:getResultResponse"/>
- <fault message="tns:ResultNotAvailableException" name="ResultNotAvailableException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getResult/Fault/ResultNotAvailableException"/>
- </operation>
- <operation name="getLimits">
- <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitsRequest" message="tns:getLimits"/>
- <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitsResponse" message="tns:getLimitsResponse"/>
+ <operation name="presetAlign">
+ <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlignRequest" message="tns:presetAlign"/>
+ <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlignResponse" message="tns:presetAlignResponse"/>
+ <fault message="tns:UnsupportedRuntimeException" name="UnsupportedRuntimeException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/UnsupportedRuntimeException"/>
+ <fault message="tns:LimitExceededException" name="LimitExceededException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/LimitExceededException"/>
+ <fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/JobSubmissionException"/>
+ <fault message="tns:WrongParameterException" name="WrongParameterException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/WrongParameterException"/>
</operation>
<operation name="cancelJob">
<input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/cancelJobRequest" message="tns:cancelJob"/>
<output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/cancelJobResponse" message="tns:cancelJobResponse"/>
</operation>
+ <operation name="pullExecStatistics">
+ <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/pullExecStatisticsRequest" message="tns:pullExecStatistics"/>
+ <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/pullExecStatisticsResponse" message="tns:pullExecStatisticsResponse"/>
+ </operation>
<operation name="getJobStatus">
<input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getJobStatusRequest" message="tns:getJobStatus"/>
<output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getJobStatusResponse" message="tns:getJobStatusResponse"/>
</operation>
- <operation name="pullExecStatistics">
- <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/pullExecStatisticsRequest" message="tns:pullExecStatistics"/>
- <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/pullExecStatisticsResponse" message="tns:pullExecStatisticsResponse"/>
+ <operation name="getLimit">
+ <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitRequest" message="tns:getLimit"/>
+ <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitResponse" message="tns:getLimitResponse"/>
</operation>
- <operation name="align">
- <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/alignRequest" message="tns:align"/>
- <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/alignResponse" message="tns:alignResponse"/>
- <fault message="tns:UnsupportedRuntimeException" name="UnsupportedRuntimeException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/UnsupportedRuntimeException"/>
- <fault message="tns:LimitExceededException" name="LimitExceededException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/LimitExceededException"/>
- <fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/JobSubmissionException"/>
+ <operation name="getLimits">
+ <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitsRequest" message="tns:getLimits"/>
+ <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitsResponse" message="tns:getLimitsResponse"/>
+ </operation>
+ <operation name="getPresets">
+ <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getPresetsRequest" message="tns:getPresets"/>
+ <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getPresetsResponse" message="tns:getPresetsResponse"/>
+ </operation>
+ <operation name="getRunnerOptions">
+ <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getRunnerOptionsRequest" message="tns:getRunnerOptions"/>
+ <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getRunnerOptionsResponse" message="tns:getRunnerOptionsResponse"/>
</operation>
</portType>
<binding name="TcoffeeWSPortBinding" type="tns:MsaWS">
<soap:binding transport="http://schemas.xmlsoap.org/soap/http" style="document"/>
- <operation name="getPresets">
+ <operation name="getResult">
<soap:operation soapAction=""/>
<input>
<soap:body use="literal"/>
<output>
<soap:body use="literal"/>
</output>
+ <fault name="ResultNotAvailableException">
+ <soap:fault name="ResultNotAvailableException" use="literal"/>
+ </fault>
</operation>
- <operation name="getLimit">
+ <operation name="align">
<soap:operation soapAction=""/>
<input>
<soap:body use="literal"/>
<output>
<soap:body use="literal"/>
</output>
+ <fault name="UnsupportedRuntimeException">
+ <soap:fault name="UnsupportedRuntimeException" use="literal"/>
+ </fault>
+ <fault name="LimitExceededException">
+ <soap:fault name="LimitExceededException" use="literal"/>
+ </fault>
+ <fault name="JobSubmissionException">
+ <soap:fault name="JobSubmissionException" use="literal"/>
+ </fault>
</operation>
- <operation name="presetAlign">
+ <operation name="customAlign">
<soap:operation soapAction=""/>
<input>
<soap:body use="literal"/>
<soap:fault name="WrongParameterException" use="literal"/>
</fault>
</operation>
- <operation name="customAlign">
+ <operation name="presetAlign">
<soap:operation soapAction=""/>
<input>
<soap:body use="literal"/>
<soap:fault name="WrongParameterException" use="literal"/>
</fault>
</operation>
- <operation name="getRunnerOptions">
+ <operation name="cancelJob">
<soap:operation soapAction=""/>
<input>
<soap:body use="literal"/>
<soap:body use="literal"/>
</output>
</operation>
- <operation name="getResult">
+ <operation name="pullExecStatistics">
<soap:operation soapAction=""/>
<input>
<soap:body use="literal"/>
<output>
<soap:body use="literal"/>
</output>
- <fault name="ResultNotAvailableException">
- <soap:fault name="ResultNotAvailableException" use="literal"/>
- </fault>
</operation>
- <operation name="getLimits">
+ <operation name="getJobStatus">
<soap:operation soapAction=""/>
<input>
<soap:body use="literal"/>
<soap:body use="literal"/>
</output>
</operation>
- <operation name="cancelJob">
+ <operation name="getLimit">
<soap:operation soapAction=""/>
<input>
<soap:body use="literal"/>
<soap:body use="literal"/>
</output>
</operation>
- <operation name="getJobStatus">
+ <operation name="getLimits">
<soap:operation soapAction=""/>
<input>
<soap:body use="literal"/>
<soap:body use="literal"/>
</output>
</operation>
- <operation name="pullExecStatistics">
+ <operation name="getPresets">
<soap:operation soapAction=""/>
<input>
<soap:body use="literal"/>
<soap:body use="literal"/>
</output>
</operation>
- <operation name="align">
+ <operation name="getRunnerOptions">
<soap:operation soapAction=""/>
<input>
<soap:body use="literal"/>
<output>
<soap:body use="literal"/>
</output>
- <fault name="UnsupportedRuntimeException">
- <soap:fault name="UnsupportedRuntimeException" use="literal"/>
- </fault>
- <fault name="LimitExceededException">
- <soap:fault name="LimitExceededException" use="literal"/>
- </fault>
- <fault name="JobSubmissionException">
- <soap:fault name="JobSubmissionException" use="literal"/>
- </fault>
</operation>
</binding>
<service name="TcoffeeWS">