Apply formatting to the JSP pages

[proteocache.git] / website / ReportProt.jsp

diff --git a/website/ReportProt.jsp b/website/ReportProt.jsp
index ad64ac1..ae06cf6 100644 (file)
--- a/website/ReportProt.jsp
+++ b/website/ReportProt.jsp
@@ -1,58 +1,69 @@
 <%@page import="java.util.ArrayList"%>
-<%@ page trimDirectiveWhitespaces="true" %>
-<%@ taglib uri="http://java.sun.com/jsp/jstl/core" prefix="c" %>
-<%@ taglib uri="http://java.sun.com/jsp/jstl/functions" prefix="fn" %>
-<%@ taglib uri="http://java.sun.com/jsp/jstl/fmt" prefix="fmt" %>
-<%@ taglib uri="http://displaytag.sf.net" prefix="dt" %>
+<%@ page trimDirectiveWhitespaces="true"%>
+<%@ taglib uri="http://java.sun.com/jsp/jstl/core" prefix="c"%>
+<%@ taglib uri="http://java.sun.com/jsp/jstl/functions" prefix="fn"%>
+<%@ taglib uri="http://java.sun.com/jsp/jstl/fmt" prefix="fmt"%>
+<%@ taglib uri="http://displaytag.sf.net" prefix="dt"%>
 
 <h3>Dundee ProteoCache query result</h3>
-<table border="1" style = "border-collapse: collapse; white-space: nowrap"> 
-<c:choose>
-<c:when test="${checkbox == 'AllProtein'}">
-<thead>
-<tr>
-<th style="text-align: centre">Number of jobs</th>
-<th style="text-align: left">Protein</th>
-</tr>
-</thead>
-<tbody>
-<c:forEach items="${result}" var="res">
-<tr>
-<td> ${res.totalId}</td>
-<td style=" text-align: left;  border-buttom:  dotted; font-family: monospace"><a title="Click to view predictions" href="ProtServlet?prot=${res.prot}&protein=whole&Search=Search">${res.prot}</a> </td>
-</tr>
-</c:forEach>
-</c:when>
-<c:otherwise>
-<thead>
-<tr>
-<th style="text-align: centre">ID</th>
-<th style="text-align: centre">Prediction</th>
-</tr>
-</thead>
-<tbody>
-<c:forEach items="${result}" var="res" varStatus="status">
-<tr>
-<td rowspan="2">${res.id}</td>
-<c:if test ="${flag == 'whole'}">
-<td  style=" text-align: left;  border-buttom:  dotted; font-family: monospace"><c:out value = "${res.prot}" /></td>
-</c:if>
-<c:if test ="${flag == 'part'}">
-<td  style=" text-align: left;  border-buttom:  dotted; font-family: monospace">
-<c:forEach items="${res.subProt}" var="seq">
-<c:choose>
-<c:when test="${fn:contains(seq, prot)}"><span style="background-color:blue">${seq}</span></c:when>
-<c:otherwise>${seq}</c:otherwise>
-</c:choose>
-</c:forEach>
-</td>
-</c:if>
-</tr>
-<tr>
-<td style="text-align: left; border-top: hidden; font-family: monospace"><c:out value = "${res.jpred}" /></td>
-</tr>
-</c:forEach>
-</c:otherwise>
-</c:choose>
-</tbody>
+<table border="1" style="border-collapse: collapse; white-space: nowrap">
+       <c:choose>
+               <c:when test="${checkbox == 'AllProtein'}">
+                       <thead>
+                               <tr>
+                                       <th style="text-align: centre">Number of jobs</th>
+                                       <th style="text-align: left">Protein</th>
+                               </tr>
+                       </thead>
+                       <tbody>
+                               <c:forEach items="${result}" var="res">
+                                       <tr>
+                                               <td>${res.totalId}</td>
+                                               <td
+                                                       style="text-align: left; border-buttom: dotted; font-family: monospace"><a
+                                                       title="Click to view predictions"
+                                                       href="ProtServlet?prot=${res.prot}&protein=whole&Search=Search">${res.prot}</a>
+                                               </td>
+                                       </tr>
+                               </c:forEach>
+               </c:when>
+               <c:otherwise>
+                       <thead>
+                               <tr>
+                                       <th style="text-align: centre">ID</th>
+                                       <th style="text-align: centre">Prediction</th>
+                               </tr>
+                       </thead>
+                       <tbody>
+                               <c:forEach items="${result}" var="res" varStatus="status">
+                                       <tr>
+                                               <td rowspan="2">${res.id}</td>
+                                               <c:if test="${flag == 'whole'}">
+                                                       <td
+                                                               style="text-align: left; border-buttom: dotted; font-family: monospace"><c:out
+                                                                       value="${res.prot}" /></td>
+                                               </c:if>
+                                               <c:if test="${flag == 'part'}">
+                                                       <td
+                                                               style="text-align: left; border-buttom: dotted; font-family: monospace">
+                                                               <c:forEach items="${res.subProt}" var="seq">
+                                                                       <c:choose>
+                                                                               <c:when test="${fn:contains(seq, prot)}">
+                                                                                       <span style="background-color: blue">${seq}</span>
+                                                                               </c:when>
+                                                                               <c:otherwise>${seq}</c:otherwise>
+                                                                       </c:choose>
+                                                               </c:forEach>
+                                                       </td>
+                                               </c:if>
+                                       </tr>
+                                       <tr>
+                                               <td
+                                                       style="text-align: left; border-top: hidden; font-family: monospace"><c:out
+                                                               value="${res.jpred}" /></td>
+                                       </tr>
+                               </c:forEach>
+               </c:otherwise>
+       </c:choose>
+       </tbody>
 </table>