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updated javadoc
[jabaws.git] / website / dm_javadoc / index-files / index-19.html
diff --git a/website/dm_javadoc/index-files/index-19.html b/website/dm_javadoc/index-files/index-19.html
index c726d02..092482d 100644 (file)
--- a/website/dm_javadoc/index-files/index-19.html
+++ b/website/dm_javadoc/index-files/index-19.html
@@ -2,12 +2,12 @@
 <!--NewPage-->\r
 <HTML>\r
 <HEAD>\r
-<!-- Generated by javadoc (build 1.6.0_14) on Wed Feb 17 16:46:28 GMT 2010 -->\r
+<!-- Generated by javadoc (build 1.6.0_24) on Fri Aug 12 14:32:04 BST 2011 -->\r
 <TITLE>\r
 V-Index\r
 </TITLE>\r
 \r
-<META NAME="date" CONTENT="2010-02-17">\r
+<META NAME="date" CONTENT="2011-08-12">\r
 \r
 <LINK REL ="stylesheet" TYPE="text/css" HREF="../stylesheet.css" TITLE="Style">\r
 \r
@@ -82,6 +82,9 @@ function windowTitle()
 <A NAME="_V_"><!-- --></A><H2>\r
 <B>V</B></H2>\r
 <DL>\r
+<DT><A HREF="../compbio/data/msa/JABAService.html#V2_SERVICE_NAMESPACE"><B>V2_SERVICE_NAMESPACE</B></A> - \r
+Static variable in interface compbio.data.msa.<A HREF="../compbio/data/msa/JABAService.html" title="interface in compbio.data.msa">JABAService</A>\r
+<DD>&nbsp;\r
 <DT><A HREF="../compbio/metadata/LimitsManager.html#validate(compbio.metadata.PresetManager)"><B>validate(PresetManager&lt;T&gt;)</B></A> - \r
 Method in class compbio.metadata.<A HREF="../compbio/metadata/LimitsManager.html" title="class in compbio.metadata">LimitsManager</A>\r
 <DD>Validate Limits\r
@@ -91,29 +94,50 @@ Method in class compbio.metadata.<A HREF="../compbio/metadata/PresetManager.html
  object.\r
 <DT><A HREF="../compbio/metadata/RunnerConfig.html#validate()"><B>validate()</B></A> - \r
 Method in class compbio.metadata.<A HREF="../compbio/metadata/RunnerConfig.html" title="class in compbio.metadata">RunnerConfig</A>\r
-<DD>Validate the arguments\r
+<DD>Validate the value of the argument.\r
 <DT><A HREF="../compbio/ws/client/Jws2Client.html#validURL(java.lang.String)"><B>validURL(String)</B></A> - \r
 Static method in class compbio.ws.client.<A HREF="../compbio/ws/client/Jws2Client.html" title="class in compbio.ws.client">Jws2Client</A>\r
 <DD>Attempt to construct the URL object from the string\r
 <DT><A HREF="../compbio/metadata/ValueConstrain.html" title="class in compbio.metadata"><B>ValueConstrain</B></A> - Class in <A HREF="../compbio/metadata/package-summary.html">compbio.metadata</A><DD>The type and the lower and upper boundaries for numerical value.<DT><A HREF="../compbio/metadata/ValueConstrain.html#ValueConstrain()"><B>ValueConstrain()</B></A> - \r
 Constructor for class compbio.metadata.<A HREF="../compbio/metadata/ValueConstrain.html" title="class in compbio.metadata">ValueConstrain</A>\r
 <DD>&nbsp;\r
-<DT><A HREF="../compbio/metadata/ValueConstrain.Type.html" title="enum in compbio.metadata"><B>ValueConstrain.Type</B></A> - Enum in <A HREF="../compbio/metadata/package-summary.html">compbio.metadata</A><DD>&nbsp;<DT><A HREF="../compbio/data/sequence/Program.html#valueOf(java.lang.String)"><B>valueOf(String)</B></A> - \r
+<DT><A HREF="../compbio/metadata/ValueConstrain.Type.html" title="enum in compbio.metadata"><B>ValueConstrain.Type</B></A> - Enum in <A HREF="../compbio/metadata/package-summary.html">compbio.metadata</A><DD>&nbsp;<DT><A HREF="../compbio/data/sequence/ConservationMethod.html#valueOf(java.lang.String)"><B>valueOf(String)</B></A> - \r
+Static method in enum compbio.data.sequence.<A HREF="../compbio/data/sequence/ConservationMethod.html" title="enum in compbio.data.sequence">ConservationMethod</A>\r
+<DD>Returns the enum constant of this type with the specified name.\r
+<DT><A HREF="../compbio/data/sequence/DisorderMethod.html#valueOf(java.lang.String)"><B>valueOf(String)</B></A> - \r
+Static method in enum compbio.data.sequence.<A HREF="../compbio/data/sequence/DisorderMethod.html" title="enum in compbio.data.sequence">DisorderMethod</A>\r
+<DD>Returns the enum constant of this type with the specified name.\r
+<DT><A HREF="../compbio/data/sequence/Program.html#valueOf(java.lang.String)"><B>valueOf(String)</B></A> - \r
 Static method in enum compbio.data.sequence.<A HREF="../compbio/data/sequence/Program.html" title="enum in compbio.data.sequence">Program</A>\r
 <DD>Returns the enum constant of this type with the specified name.\r
+<DT><A HREF="../compbio/data/sequence/SMERFSConstraints.html#valueOf(java.lang.String)"><B>valueOf(String)</B></A> - \r
+Static method in enum compbio.data.sequence.<A HREF="../compbio/data/sequence/SMERFSConstraints.html" title="enum in compbio.data.sequence">SMERFSConstraints</A>\r
+<DD>Returns the enum constant of this type with the specified name.\r
 <DT><A HREF="../compbio/metadata/JobStatus.html#valueOf(java.lang.String)"><B>valueOf(String)</B></A> - \r
 Static method in enum compbio.metadata.<A HREF="../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A>\r
 <DD>Returns the enum constant of this type with the specified name.\r
 <DT><A HREF="../compbio/metadata/ValueConstrain.Type.html#valueOf(java.lang.String)"><B>valueOf(String)</B></A> - \r
 Static method in enum compbio.metadata.<A HREF="../compbio/metadata/ValueConstrain.Type.html" title="enum in compbio.metadata">ValueConstrain.Type</A>\r
 <DD>Returns the enum constant of this type with the specified name.\r
-<DT><A HREF="../compbio/ws/client/Jws2Client.Services.html#valueOf(java.lang.String)"><B>valueOf(String)</B></A> - \r
-Static method in enum compbio.ws.client.<A HREF="../compbio/ws/client/Jws2Client.Services.html" title="enum in compbio.ws.client">Jws2Client.Services</A>\r
+<DT><A HREF="../compbio/ws/client/Services.html#valueOf(java.lang.String)"><B>valueOf(String)</B></A> - \r
+Static method in enum compbio.ws.client.<A HREF="../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</A>\r
 <DD>Returns the enum constant of this type with the specified name.\r
+<DT><A HREF="../compbio/data/sequence/ConservationMethod.html#values()"><B>values()</B></A> - \r
+Static method in enum compbio.data.sequence.<A HREF="../compbio/data/sequence/ConservationMethod.html" title="enum in compbio.data.sequence">ConservationMethod</A>\r
+<DD>Returns an array containing the constants of this enum type, in
+the order they are declared.\r
+<DT><A HREF="../compbio/data/sequence/DisorderMethod.html#values()"><B>values()</B></A> - \r
+Static method in enum compbio.data.sequence.<A HREF="../compbio/data/sequence/DisorderMethod.html" title="enum in compbio.data.sequence">DisorderMethod</A>\r
+<DD>Returns an array containing the constants of this enum type, in
+the order they are declared.\r
 <DT><A HREF="../compbio/data/sequence/Program.html#values()"><B>values()</B></A> - \r
 Static method in enum compbio.data.sequence.<A HREF="../compbio/data/sequence/Program.html" title="enum in compbio.data.sequence">Program</A>\r
 <DD>Returns an array containing the constants of this enum type, in
 the order they are declared.\r
+<DT><A HREF="../compbio/data/sequence/SMERFSConstraints.html#values()"><B>values()</B></A> - \r
+Static method in enum compbio.data.sequence.<A HREF="../compbio/data/sequence/SMERFSConstraints.html" title="enum in compbio.data.sequence">SMERFSConstraints</A>\r
+<DD>Returns an array containing the constants of this enum type, in
+the order they are declared.\r
 <DT><A HREF="../compbio/metadata/JobStatus.html#values()"><B>values()</B></A> - \r
 Static method in enum compbio.metadata.<A HREF="../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A>\r
 <DD>Returns an array containing the constants of this enum type, in
@@ -122,8 +146,8 @@ the order they are declared.
 Static method in enum compbio.metadata.<A HREF="../compbio/metadata/ValueConstrain.Type.html" title="enum in compbio.metadata">ValueConstrain.Type</A>\r
 <DD>Returns an array containing the constants of this enum type, in
 the order they are declared.\r
-<DT><A HREF="../compbio/ws/client/Jws2Client.Services.html#values()"><B>values()</B></A> - \r
-Static method in enum compbio.ws.client.<A HREF="../compbio/ws/client/Jws2Client.Services.html" title="enum in compbio.ws.client">Jws2Client.Services</A>\r
+<DT><A HREF="../compbio/ws/client/Services.html#values()"><B>values()</B></A> - \r
+Static method in enum compbio.ws.client.<A HREF="../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</A>\r
 <DD>Returns an array containing the constants of this enum type, in
 the order they are declared.\r
 </DL>\r