X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=conf%2Fsettings%2FMafftLimits.xml;h=b3b3f81f6487c5b884e9f4eba78219e11870e4bb;hb=14c406769ac5cd4acfbc4819bb3dc967a51e4bb6;hp=7067ff57df25e2ba3fa8da579907836ad08f92ba;hpb=b5ed73498a3f12da3f6f8465ec115065ec98e931;p=jabaws.git

diff --git a/conf/settings/MafftLimits.xml b/conf/settings/MafftLimits.xml
index 7067ff5..b3b3f81 100644
--- a/conf/settings/MafftLimits.xml
+++ b/conf/settings/MafftLimits.xml
@@ -2,17 +2,17 @@
 <limits>
  <runnerClassName>compbio.runner.mafft.Mafft</runnerClassName>
 	<limit isDefault="true">
-		<seqNumber>100000</seqNumber>
-		<seqLength>100000</seqLength>
+		<seqNumber>1000</seqNumber>
+		<seqLength>1000</seqLength>
 	</limit>
 	<limit isDefault="false">
 		<preset># LocalEngineExecutionLimit #</preset>
-		<seqNumber>100000</seqNumber>
-		<seqLength>100000</seqLength>
+		<seqNumber>20</seqNumber>
+		<seqLength>500</seqLength>
 	</limit>
 	
-	<!-- Uncomment/edit these if you would like to have separate limits for presets	--> 
-	<!-- 
+	<!-- Limits for presets	--> 
+
 	<limit isDefault="false">
 		<preset>L-INS-i (Accuracy-oriented)</preset>
 		<seqNumber>500</seqNumber>
@@ -43,6 +43,5 @@
 		<seqNumber>2000</seqNumber>
 		<seqLength>1000</seqLength>
 	</limit>
-	 -->
 	
 </limits>