X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=examples%2FformComplete.html;h=91b0670bebd208770bb630bc17cc3b1ad28f24ad;hb=e5162c81c20d1da22a7eac533126d074d654ef09;hp=930f7785cb0a79cfc5cf3d1f32e89fc8c8925321;hpb=f42b2964f801f8dfee54ef7ebeacebea2d92e5ad;p=jalview.git

diff --git a/examples/formComplete.html b/examples/formComplete.html
index 930f778..91b0670 100644
--- a/examples/formComplete.html
+++ b/examples/formComplete.html
@@ -79,7 +79,11 @@ function mcancelclosetime()
 document.onclick = mclose; 
 // -->
 </script>
-
+<script>
+<!--//--><![CDATA[//><!--
+var _gaq = _gaq || [];_gaq.push(["_setAccount", "UA-9060947-1"]);_gaq.push(["_trackPageview"]);(function() {var ga = document.createElement("script");ga.type = "text/javascript";ga.async = true;ga.src = ("https:" == document.location.protocol ? "https://ssl" : "http://www") + ".google-analytics.com/ga.js";var s = document.getElementsByTagName("script")[0];s.parentNode.insertBefore(ga, s);})();
+//--><!]]>
+</script>
 </head>
 
 
@@ -87,10 +91,10 @@ document.onclick = mclose;
 
 
 <div id="header">
-<div id="logo"><a href="/" title="Home"></a></div>
+<div id="logo"><a href="http://www.jalview.org" title="Home"></a></div>
 <ul id="buttons">
 <li id="applet"><a href="applets.html" title="applet"></a></li>
-<li id="desktop"><a href="/webstart/jalview.jnlp" title="desktop"></a></li>
+<li id="desktop"><a href="../webstart/jalview.jnlp" title="desktop"></a></li>
 </ul>
 </div>
 
@@ -99,39 +103,38 @@ document.onclick = mclose;
 <div id="navInner">
 
 <ul id="sddm">
- <li><a href="#">Home</a></li>
- <li><a href="#" onmouseover="mopen('m1')" onmouseout="mclosetime()">About</a>
+ <li><a href="http://www.jalview.org">Home</a></li>
+ <li><a href="http://www.jalview.org/about" onmouseover="mopen('m1')" onmouseout="mclosetime()">About</a>
   <div id="m1" onmouseover="mcancelclosetime()" onmouseout="mclosetime()">
-  <a href="#">Documentation</a>
-  <a href="#">Publications</a>
-  <a href="#">Credits</a>
-  <a href="#">Screenshots</a>
+  <a href="http://www.jalview.org/about/documentation">Documentation</a>
+  <a href="http://www.jalview.org/about/citation">Publications</a>
+  <a href="http://www.jalview.org/about/credits">Credits</a>
   </div>
  </li>
- <li><a href="#">FAQ</a></li>
- <li><a href="#" onmouseover="mopen('m3')" onmouseout="mclosetime()" class="community">Community</a>
+ <li><a href="http://www.jalview.org/faq">FAQ</a></li>
+ <li><a href="http://www.jalview.org/community" onmouseover="mopen('m3')" onmouseout="mclosetime()" class="community">Community</a>
   <div id="m3" onmouseover="mcancelclosetime()" onmouseout="mclosetime()">
-  <a href="#">News Mailing List</a>
-  <a href="#">Discussion Mailing List</a>
-  <a href="#">Links</a>
-  <a href="#">Community News</a>
+  <a href="http://www.jalview.org/mailman/listinfo/jalview-announce">News Mailing List</a>
+  <a href="http://www.jalview.org/mailman/listinfo/jalview-discuss">Discussion Mailing List</a>
+  <a href="http://www.jalview.org/community/links">Links</a>
+  <a href="http://www.jalview.org/community/community-news">Community News</a>
   </div>
  </li>
- <li><a href="#" onmouseover="mopen('m4')" onmouseout="mclosetime()" class="development">Development</a>
+ <li><a href="http://www.jalview.org/development" onmouseover="mopen('m4')" onmouseout="mclosetime()" class="development">Development</a>
   <div id="m4" onmouseover="mcancelclosetime()" onmouseout="mclosetime()">
-  <a href="#">Release History</a>
-  <a href="#">Jalview Bug Tracker</a>
-  <a href="#">Jalview Git Web</a>
-  <a href="#">Development News</a>
+  <a href="http://www.jalview.org/development/release-history">Release History</a>
+  <a href="http://issues.jalview.org">Jalview Bug Tracker</a>
+  <a href="http://source.jalview.org/gitweb/">Jalview Git Web</a>
+  <a href="http://www.jalview.org/development/development-news">Development News</a>
   </div>
  </li>
- <li><a href="#" onmouseover="mopen('m5')" onmouseout="mclosetime()" class="training">Training</a>
+ <li><a href="http://www.jalview.org/training" onmouseover="mopen('m5')" onmouseout="mclosetime()" class="training">Training</a>
   <div id="m5" onmouseover="mcancelclosetime()" onmouseout="mclosetime()">
-  <a href="#">Training Courses</a>
-  <a href="#">Training News</a>
+  <a href="http://www.jalview.org/training/training-courses">Training Courses</a>
+  <a href="http://www.jalview.org/training/training-news">Training News</a>
   </div>
  </li>
- <li><a href="#" class="download-right">Download</a></li>
+ <li><a href="http://www.jalview.org/download" class="download-right">Download</a></li>
 </ul>
 <div style="clear:both"></div>
 </div>
@@ -158,7 +161,7 @@ document.onclick = mclose;
 		instance on the page.<br>
 		View the source in your browser to see how it has been done. <br>
 		<a name="api">View the full <a href="jalviewLiteJs.html">JalviewLite API documentation</a>.</a>
-		<applet code="jalview.bin.JalviewLite" width="140" height="35"
+		<applet code="jalview.bin.JalviewLite" width="0" height="0"
 			archive="jalviewApplet.jar" name="Jalview">
 			<param name="file" value="plantfdx.fa">
 			<param name="features" value="plantfdx.features">
@@ -167,14 +170,13 @@ document.onclick = mclose;
 			<param name="windowHeight" value="500">
 			<param name="windowWidth" value="650">
 			<param name="showFullId" value="false">
-			<param name="RGB" value="F2F2FF">
-			<param name="linkLabel_1" value="SRS">
-			<param name="linkUrl_1"
-				value="http://srs.ebi.ac.uk/srs7bin/cgi-bin/wgetz?-e+[uniprot-all:$SEQUENCE_ID$]+-vn+2">
-			<param name="linkLabel_2" value="Uniprot">
-			<param name="linkUrl_2"
-				value="http://us.expasy.org/cgi-bin/niceprot.pl?$SEQUENCE_ID$">
-			<param name="hidefeaturegroups" value="uniprot" />
+			       <param name="linkLabel_1" value="Uniprot">
+        <param name="linkUrl_1"
+         value="http://www.uniprot.org/uniprot/$SEQUENCE_ID$">
+         <param name="linkLabel_2" value="Expasy">
+          <param name="linkUrl_2"
+           value="http://us.expasy.org/cgi-bin/niceprot.pl?$SEQUENCE_ID$">
+<param name="hidefeaturegroups" value="uniprot" />
 			<param name="showbutton" value="false" />
 		</applet>
 		<form name="exampleForm"><br>
@@ -202,10 +204,10 @@ document.onclick = mclose;
 			value="Hide groups" /></div>
 		</form>
 		</div>
-
+</div>
 <div id ="footer">
 <div id="innerFooter">
-<div id="copyright"><p>Copyright all rights reserved 2012</p></div>
+<div id="copyright"><p>Published under <a href="http://creativecommons.org/licenses/by-sa/3.0/">CC-SA 3.0</a></p></div>
 <div id="cite">
 <p>
 If you use Jalview in your work, please cite this publication:
@@ -214,11 +216,11 @@ If you use Jalview in your work, please cite this publication:
 <p>
 Waterhouse, A.M., Procter, J.B., Martin, D.M.A, Clamp, M. and Barton, G. J. (2009)
 "Jalview Version 2 - a multiple sequence alignment editor and analysis workbench"
-Bioinformatics 25 (9) 1189-1191 doi: 10.1093/bioinformatics/btp033
+Bioinformatics 25 (9) 1189-1191 <a href="http://dx.doi.org/10.1093/bioinformatics/btp033">doi: 10.1093/bioinformatics/btp033</a>
 </p>
 </div>
 </div>
 </div>
 </body>
 </html>
-  
\ No newline at end of file
+