X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=help%2Fhtml%2Fcalculations%2Fredundancy.html;h=5b1badb3629a325744833a6934fb83e0cbb8e53e;hb=94751f42fae76e075240eeac0c708abbc8cf9253;hp=4b42238e872ec89f0b87963f251aa6e94dcafff9;hpb=5e1efef040594dbf9b5364b523bd62c2f977cb50;p=jalview.git diff --git a/help/html/calculations/redundancy.html b/help/html/calculations/redundancy.html index 4b42238..5b1badb 100755 --- a/help/html/calculations/redundancy.html +++ b/help/html/calculations/redundancy.html @@ -1,16 +1,40 @@ +
Removing redundancy
-Selecting the option in the Alignment window's Edit
-menu or pressing 'CONTROL+D' brings up a dialog box
-asking you to select a threshold. If the percentage identity between the
-aligned positions of any two sequences in the visible alignment exceeds
-this value, the shorter sequence is discarded.
Note: The redundancy
-calculation is done when the dialog box is opened. For large numbers
-of sequences this can take a long time as all pairs have to be compared.
-
+ Removing redundancy +
+
+ Selecting the option in the Alignment window's Edit
+ menu or pressing 'CONTROL+D' brings up a dialog box
+ asking you to select a threshold. If the percentage identity between
+ the aligned positions of any two sequences in the visible alignment
+ exceeds this value, the shorter sequence is discarded.
Note:
+ The redundancy calculation is done when the dialog box is opened.
+ For large numbers of sequences this can take a long time as all
+ pairs have to be compared.
+