X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=help%2Fhtml%2FcolourSchemes%2Fuser.html;h=5eacca90c620d9c7f1786a578153955931622b4e;hb=f72a3a3b20d2b4cccb88e809fe27a7a76951772f;hp=315cc94424f0c2121f0b12487cc9701aaa21dee9;hpb=035532ebc8706d933e3e2e2bf33b590546aba8b3;p=jalview.git diff --git a/help/html/colourSchemes/user.html b/help/html/colourSchemes/user.html index 315cc94..5eacca9 100755 --- a/help/html/colourSchemes/user.html +++ b/help/html/colourSchemes/user.html @@ -1,22 +1,51 @@ - -User Defined Colours - -

User Defined Colours

-

-

You may define any number of new colour schemes, each with a unique name.
-
- Each of the residues in a new colour scheme may be assigned a new user defined - colour.
-
- Click "Apply" or "OK" to set your new colours on the active - alignment window.

-

Click "Cancel" to undo your changes if you pressed the "Apply" - button.
-
- If you save your colour scheme with a unique name the colour scheme name will - be added to the "Colour" menu on each new alignment window.
-
- Any saved colour schemes will be automatically loaded the next time you use - Jalview.

- - + + +User Defined Colours + +

User Defined Colours

+

+

You may define any number of new colour schemes, each with a unique name.
+
+ Each of the residues in a colour scheme may be assigned any chosen colour.
+ Select one or more residues, then select the desired colour.
+ Use Ctrl-click to select multiple residues, or click then Shift-click to select a block.
+ Note that the currently selected buttons are highlighted by a lighter text colour. +

+ The Case Sensitive option allows you to choose distinct colours for upper and + lower case residue codes. +

+ Click Apply or OK to set your new colours on the active + alignment window.
+ Click Cancel to undo your changes if you pressed the Apply + button. +

+ If you save your colour scheme with a unique name, the colour scheme name will + be added to the Colour menu on each new alignment window.
+
+ Any saved colour schemes will be automatically loaded the next time you use + Jalview. +

+ Note: the screenshot shows the appearance when running Java version 6. For Java 7 (from Jalview 2.8.2) only the Swatches colour chooser is + currently supported (for reasons of available screen space). +

+ +