X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;ds=inline;f=help%2Fhtml%2Ffeatures%2Fviewingpdbs.html;h=1f49498da88dbc013c856e6a395845fb4801ba6a;hb=e1cd94839128776e14e51ded3f3be2dcc7e72273;hp=679f35303af73c34f709b32761589352d37c64b0;hpb=793968f15efc19ba0b8a91b0078e6b23ee4e2ff9;p=jalview.git
diff --git a/help/html/features/viewingpdbs.html b/help/html/features/viewingpdbs.html
index 679f353..1f49498 100755
--- a/help/html/features/viewingpdbs.html
+++ b/help/html/features/viewingpdbs.html
@@ -1,21 +1,24 @@
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see
Viewing PDB Structures
Jalview can view protein structures associated with a sequence -via the "Structure→View PDB entry:" entries from a -sequence's pop-up menu. Once a pdb +via the "Structure→" submenu from a +sequence's pop-up menu.
+The following menu entries are provided for viewing structure data
+
If a single pdb structure is selected, one of the following will happen:
- Additionally, if several of the sequences in the currently selected - region of the alignment have associated structures, then Jalview will - provide a 'View X structures' entry in the submenu. This - option will open a new Jmol view containing all the structures - available for all selected sequences, superimposed using the currently - selected region of the alignment. (This capability was added - in Jalview 2.7) -
- +Associating PDB files with Sequences
To associate PDB files with a sequence, right click on a sequence ID and select "Structure→ Associate Structure with Sequence", and one of the submenus:
@@ -69,9 +85,8 @@ Sequence", and one of the submenus: EBI, to fetch the PDB file with the entered Id.Importing PDB Entries or files in PDB format